 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
462869334 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WRKY |
| Protein Properties |
Length: 437aa MW: 47243.6 Da PI: 10.7749 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462869334 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99 | 2.9e-31 | 371 | 428 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+
462869334 371 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPAMLIVTYEGEHNHT 428
9*************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 437 aa
Download sequence Send
to blast |
PRSSPVLSSS PLFRCCASLL VSDGRRPPSP IPSAPHVQRR NAQPVRRRRC CSWEWRGAEF 60
HLSWRGETRV QTEPSVSSPF SGMEEVEAAN RAAVESCHRV LALLSQQQDP ALLKSIASET 120
GEACAKFRKV TALLGDGGGG RSGHARGRFS GRGRPMGFLS HKGVLGSGSG NAVETMPSCS 180
AAPSSSTSYA QLRARVNGAS ESRGLDLASL SGAHQLGAPK LVQPLSVQFQ IGNVAHRYPF 240
HQQPSRQKLQ AEMFKRSNSG ISLKFDSPSA SVATGTMSSA RSYMSSLSMD GSVVSLEGKR 300
PFHLVGVPVA SDPADVQHAP KRRCMGKGED GRGKCAVTGR CHCSKRSRKL RNKRSIKVPA 360
ISNKIADIPP DEYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERC VDDPAMLIVT 420
YEGEHNHTRL PAQSAQT
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
