 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462869308 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WRKY |
| Protein Properties |
Length: 254aa MW: 27272.6 Da PI: 9.3894 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462869308 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 64.5 | 1.8e-20 | 125 | 162 | 2 | 38 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38
+Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v
462869308 125 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQV 162
7***************************99*******9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MAVGVDPRGS DCSPSSSKLV ADTAASTPMD YCPGTGNGGM LPLPTFDHHR RRSPEEAQGW 60
LPNKVPKFLP AKGPEPVPEA ATMRKARVSV RARSEAPMVI NHLIKRLGIY PNLESRIVHD 120
EMQISDGCQW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVMNGGVWCG VLQVQRCAED 180
RTVLITTYEG NHNHPLPPAA MAMASTTAAA ASMLLSGSMP SADGSLMAGS NFLARAVLPC 240
SSSCKRCLRV SMGI
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC120986 | 7e-96 | AC120986.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone OJ1781_H11, complete sequence. |
| GenBank | AP014961 | 7e-96 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012613 | 7e-96 | CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence. |
