 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462868864 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
bHLH |
| Protein Properties |
Length: 227aa MW: 25243.6 Da PI: 7.0764 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462868864 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 52.4 | 9.5e-17 | 48 | 94 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn E+rRR+riN+++ L++l+P++ K +Ka++L A+eY+k+Lq
462868864 48 VHNLSEKRRRSRINEKMKALQTLVPNS-----SKTDKASMLDDAIEYLKQLQ 94
6*************************8.....7******************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MDGQQLDLIM RHQSMANICD SEDALGSSES EPARPARPRG KRTRAAEVHN LSEKRRRSRI 60
NEKMKALQTL VPNSSKTDKA SMLDDAIEYL KQLQLQVQML SMRNGLYLPP VNLSGAPDTV 120
APSDIRVAQY LGGVKASNSG VVLLPVNENS AGQHLIDRPN HEQRLNKTLF LPSGPNAKTV 180
EPQFLQESSQ SNLQSFELTL PPEMIFQQDM MLNYRLTSDH ETPSVPG
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT033382 | 1e-140 | BT033382.1 Zea mays full-length cDNA clone ZM_BFb0041N16 mRNA, complete cds. |
| GenBank | BT064056 | 1e-140 | BT064056.1 Zea mays full-length cDNA clone ZM_BFc0135E23 mRNA, complete cds. |
| GenBank | KJ726988 | 1e-140 | KJ726988.1 Zea mays clone pUT3689 bHLH transcription factor (bHLH168) mRNA, partial cds. |
