 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462866710 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
bHLH |
| Protein Properties |
Length: 372aa MW: 40984.6 Da PI: 9.7506 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462866710 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 31.8 | 2.6e-10 | 152 | 199 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++ rE+ RRdr+N++f+eL +l + + +K +K++iL A++ +++L
462866710 152 TKACREKLRRDRLNERFNELCAILEPG---KPPKADKVAILSDATRLLSQL 199
5678**********************9...99****************999 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 372 aa
Download sequence Send
to blast |
MSCAGGQSGS GGGWLLDYGL VEEEIQGSEF IYMVDDPAVS SVILGFDAPR KEDGVQDNSG 60
PKKRQSSYFL LTQFIDLKPS LACDWRHIRD AWRSAVRKSS GPVKWKPSTS LMQRASQTFR 120
TSSTDFEHMR AQFDGYSPLT RSRPESSAPP GTKACREKLR RDRLNERFNE LCAILEPGKP 180
PKADKVAILS DATRLLSQLR AEAQKLQKSN ESLQDSIKSL KAEKSELRDE KTRLKAERER 240
LEQMLKAVGA ASAPAQFVPH PPAXXXXPRP AAFWQWIPPT SLDTSKDPAH WPPVAFEDKM 300
NGCSRRRLAT GASSQARDPG WGGVPLVEAT MAAFTLAVMP PLPTRDLSPK VSKAAIDKLA 360
VLEPLSSHAN ST
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FP100980 | 1e-120 | FP100980.1 Phyllostachys edulis cDNA clone: bphyem120e16, full insert sequence. |
