PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462864231
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 471aa    MW: 51156 Da    PI: 6.5226
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462864231genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.61.5e-09186226545
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                k  rr+++NReAAr+sR+RKka+i++Le    +L++  ++L
  462864231 186 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 226
                7889************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-8182245IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312184228IPR004827Basic-leucine zipper domain
CDDcd147083.48E-22186238No hitNo description
SuperFamilySSF579595.13E-7186229No hitNo description
PfamPF001701.0E-6186226IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-7187230No hitNo description
PROSITE patternPS000360189204IPR004827Basic-leucine zipper domain
PfamPF141446.0E-33268343IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MESRQGGAAA TAAEDAGGAM PSFGPPQHAI HTDVNSMQPS GVTDFGALAQ SAGFRIEDLA  60
NLNTNTFSNL KPSIHTNNND PLQFGSYRKP ISSLHTSTTT AATVASRIDP SSLAQQTGVQ  120
TNLVSVTSGN IENWGESALA AASPMTDTST DPDTDEGNQM QFEQGQLGGP TISDSSDKSR  180
DKLDQKTLRR LAQNREAARK SRLRKKAYIQ NLESSRLKLT QLEQELQRAR QQGIFISSSG  240
DQPQSTSGNG ALAFDMEYAR WLEEHNKHTN ELRAAVNAHA GDNDLRSIVD SIMAHYDEIF  300
KLKGVAAKAD VFHVLSGMWK TPAERCFMWL GGFRSSELLK LLAGQLEPLT DQQLLGISNL  360
QQSSQQAEDA LSQGMEALQQ SLAETLASGS LGPAGSSGNV ANYMGQMAMA MGKLGTLENF  420
LRQADNLRLQ TLQQMQRILT TRQSARALLA ISDYFSRLRA LSSLWHARPR E
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap462864231
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002458658.10.0transcription factor TGAL1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLC5XMK20.0C5XMK2_SORBI; Uncharacterized protein
STRINGSb03g037560.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-151bZIP family protein