PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462863704 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | VOZ | ||||||||
Protein Properties | Length: 589aa MW: 64936.6 Da PI: 5.3931 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 424.5 | 1.6e-130 | 290 | 507 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdls 99 p+p+afl+pkcalwdc+rpa gse++qdycs +ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vgip cegaat+kspwna+elfdl 462863704 290 PAPAAFLRPKCALWDCPRPAMGSERWQDYCSIYHADLAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGIPICEGAATSKSPWNAPELFDLY 389 89*************************************9879********************************************************* PP VOZ 100 llegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgk 199 ++ege+irewlffdkprraf+sgnrkqrslpdy grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhlyeyein++da+alyrle+k++d+kksak+k 462863704 390 IFEGESIREWLFFDKPRRAFDSGNRKQRSLPDYGGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLYEYEINDCDAFALYRLEFKSSDAKKSAKSK 489 **************************************************************************************************** PP VOZ 200 vskdsladlqkklgrlta 217 +++++l+++q++++rl+a 462863704 490 LACNPLNEIQQQMVRLSA 507 ****************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 589 aa Download sequence Send to blast |
PENSLEHLAP ATQDGSERKK KKRLHDPIHS SPRQLISGGG GDGEGAFVAG GVAAPSVPRA 60 RQDPRRRPPG DVLRPPVRAQ GLPMLREWRA ELSAPSPASS LQQGNNGELS DPPSETLRLL 120 HLAAAKEEED DATSKLVDQQ QQPPPPPPAP VNQGPGHVQS GQDMKLEPAE EAVTVAVAPQ 180 QPPQGQVILG NGGGIPAPTA AAAVFHDQMY YVNQELTVED FLYDDDYKLN LTGSNPDVLN 240 NLEGIGQLEY PQFNFPQELP PNMYLDMSNC GQSAGDTFLH MSDLLTTMTP APAAFLRPKC 300 ALWDCPRPAM GSERWQDYCS IYHADLAVKE EGPPGTMPVI RPRGIDLKDG PLFAALSAKI 360 QGKHVGIPIC EGAATSKSPW NAPELFDLYI FEGESIREWL FFDKPRRAFD SGNRKQRSLP 420 DYGGRGWHES RKQVMKDFGG LKRSYYMDPQ PSSSYEWHLY EYEINDCDAF ALYRLEFKSS 480 DAKKSAKSKL ACNPLNEIQQ QMVRLSADSP VDTKRLSRSR IKANPKDVNA NIYSASNTTI 540 QANVPNAYQA VPQVDQMQFL NGDVVYGPHL PYGYSTERSD FYWNSNNGA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 16 | 23 | ERKKKKRL |
2 | 17 | 22 | RKKKKR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462863704 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015688108.1 | 0.0 | PREDICTED: transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 1e-133 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A1E5VWW5 | 0.0 | A0A1E5VWW5_9POAL; Transcription factor VOZ1 | ||||
STRING | Si000864m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2343 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-117 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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