PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462862682
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bHLH
Protein Properties Length: 434aa    MW: 46201.3 Da    PI: 6.192
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462862682genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.71.2e-09263311355
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  462862682 263 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 311
                58*************************9....556*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.02E-11258315No hitNo description
SuperFamilySSF474596.41E-17258328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.65260310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16261327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.2E-7263311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.2E-11266316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
GO:0046983Molecular Functionprotein dimerization activity
GO:0046983Molecular Functionprotein dimerization activity
GO:0046983Molecular Functionprotein dimerization activity
GO:0046983Molecular Functionprotein dimerization activity
GO:0046983Molecular Functionprotein dimerization activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    Send to blast
MDMNNESNQE KGMESNRTSS GGAGIPVEWQ SQFSAAFPCA PAQQQQAGPM MDSFASAGLW  60
ASTSQAMGLS DVSAMSAARG HGFLAPVPGF LPQGLGNFPV DSGFIERAAR ASCFGGGGGG  120
LMGGNAGYGA ADQPMNNAFS GSSEALLDHQ RKDGNDKAEP DHGRRNDHDE VPSSEAAGGD  180
CSSKGTSDSK KRRRPNEMGA DQVQSSNLPA DSANESVHSK DKGEENSPAT TNGKSKGKGT  240
KETSESQKEE YIHVRARRGQ ATNSHSLAER LRREKISERM KLLQDLVPGC SKVTGKAVML  300
DEIINYVQSL QRQVEFLSMK LATVNPRLDL NIEGLLSKDL LRFPGVSSSS IGFSPEMMHP  360
QLQLSQPGLM HGGAAGMANP DVFRRIIQAQ LSTIDGSQMP HTLNGSFSDV TQMAYPSLGS  420
QDLSMRPSQD GFQM
Cis-element ? help Back to Top
SourceLink
PlantRegMap462862682
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012698809.10.0transcription factor bHLH49 isoform X2
RefseqXP_021308861.10.0transcription factor bHLH49 isoform X1
TrEMBLK3ZTF20.0K3ZTF2_SETIT; Uncharacterized protein
STRINGSi029882m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29093785
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.22e-60bHLH family protein