 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
462861451 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WRKY |
| Protein Properties |
Length: 308aa MW: 32971.2 Da PI: 8.3195 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462861451 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 90.1 | 1.8e-28 | 145 | 204 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv++sae+ +v++ tYegeHnh+
462861451 145 VKDGYQWRKYGQKVTRDNPSPRAYFRCAYApSCPVKKKVQKSAEESSVLVATYEGEHNHP 204
58***************************99****************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0002237 | Biological Process | response to molecule of bacterial origin |
| GO:0009611 | Biological Process | response to wounding |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0010200 | Biological Process | response to chitin |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050691 | Biological Process | regulation of defense response to virus by host |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MMLTDSARHA GFSPVCLDLS VGLPTPRRDA EMEADAEHDR KAGGRATSSM SDEEAKTLEA 60
KLTQVSEENR RLSEMIAHLY AAQIARPDSP AAAGRKRERD SPELSNSSDR AVSPPLALSD 120
GASCKRIKVS RVCTRIDPAD TTLTVKDGYQ WRKYGQKVTR DNPSPRAYFR CAYAPSCPVK 180
KKVQKSAEES SVLVATYEGE HNHPCPTRAG GLPCIPTRSG SVPCSISINS SSSGPTITLD 240
LTKHGGAGGG GVRVLGADQA PDLKKLCREV ASPEFRTALV EQMASVLTSN TDFTGALAAA 300
ILRQLPEY
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000250|UniProtKB:Q6QHD1}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by biotic elicitors (e.g. fungal chitin oligosaccharide) (By similarity). Induced by pathogen infection (e.g. M.grisea and X.oryzae pv. oryzae (Xoo)) (PubMed:16528562). Accumulates after treatment with benzothiadiazole (BTH) and salicylic acid (SA) (By similarity). {ECO:0000250|UniProtKB:Q6EPZ2, ECO:0000269|PubMed:16528562}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT035304 | 5e-85 | BT035304.1 Zea mays full-length cDNA clone ZM_BFb0054B07 mRNA, complete cds. |
| GenBank | BT068493 | 5e-85 | BT068493.1 Zea mays full-length cDNA clone ZM_BFb0234B18 mRNA, complete cds. |
| GenBank | EU518772 | 5e-85 | EU518772.1 Zea mays WRKY DNA-binding protein (WRKY) mRNA, complete cds. |
| GenBank | KJ726810 | 5e-85 | KJ726810.1 Zea mays clone pUT3166 WRKY transcription factor (WRKY53) mRNA, partial cds. |
