PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462857486 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 349aa MW: 39036 Da PI: 9.0481 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.6 | 3.5e-10 | 133 | 172 | 5 | 41 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k+ rr+++NReAAr+sR++Kka++e+Le+ k ++Le+e 462857486 133 KALRRLAQNREAARKSRLKKKAYVEQLETsrlKLAQLEKE 172 889*************************833344444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.5E-7 | 127 | 192 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.1E-8 | 127 | 177 | No hit | No description |
PROSITE profile | PS50217 | 8.623 | 131 | 175 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-7 | 133 | 172 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.76E-21 | 133 | 185 | No hit | No description |
SuperFamily | SSF57959 | 1.31E-6 | 133 | 175 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 136 | 151 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.2E-17 | 216 | 273 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MRMGADCSAR TVLDEMANTG CAWPWRHRVI SGRVEGGWWK PNSPGDSKMR FTVWSSVRST 60 EKGNKIKSGS FKLYSIGNIG NWEEYNMAYA SPGTDTSTDP DADEKNQMFE LGHLTANEAF 120 DSGGKSKDEL GTKALRRLAQ NREAARKSRL KKKAYVEQLE TSRLKLAQLE KELQRARQQG 180 IFISTPGNQP HSTCENGTLA FETEHGRWLE EHNKLINELR AAVSTHAGDG DLRRIVDSIM 240 AHYCESFRLR GAAARADAFH VLSGMWKAPV ERCSSSNVAD CTTQTEAAMA KLGTLENFLQ 300 EADNLRLQTL QQMQCILTTR QSARALLAIS DYFSRLRALS SLWIARPQA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462857486 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020405654.1 | 1e-116 | uncharacterized protein LOC542756 isoform X2 | ||||
Swissprot | Q6IVC2 | 9e-91 | TGAL1_ORYSJ; Transcription factor TGAL1 | ||||
TrEMBL | A0A1D6G9S0 | 1e-117 | A0A1D6G9S0_MAIZE; Octopine synthase binding factor4 | ||||
STRING | Pavir.Eb03507.1.p | 1e-113 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP25545 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 2e-79 | TGACG motif-binding factor 6 |
Publications ? help Back to Top | |||
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