PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462857486
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 349aa    MW: 39036 Da    PI: 9.0481
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462857486genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10133172541
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                k+ rr+++NReAAr+sR++Kka++e+Le+   k ++Le+e
  462857486 133 KALRRLAQNREAARKSRLKKKAYVEQLETsrlKLAQLEKE 172
                889*************************833344444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.5E-7127192IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.1E-8127177No hitNo description
PROSITE profilePS502178.623131175IPR004827Basic-leucine zipper domain
PfamPF001702.5E-7133172IPR004827Basic-leucine zipper domain
CDDcd147081.76E-21133185No hitNo description
SuperFamilySSF579591.31E-6133175No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
PfamPF141441.2E-17216273IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MRMGADCSAR TVLDEMANTG CAWPWRHRVI SGRVEGGWWK PNSPGDSKMR FTVWSSVRST  60
EKGNKIKSGS FKLYSIGNIG NWEEYNMAYA SPGTDTSTDP DADEKNQMFE LGHLTANEAF  120
DSGGKSKDEL GTKALRRLAQ NREAARKSRL KKKAYVEQLE TSRLKLAQLE KELQRARQQG  180
IFISTPGNQP HSTCENGTLA FETEHGRWLE EHNKLINELR AAVSTHAGDG DLRRIVDSIM  240
AHYCESFRLR GAAARADAFH VLSGMWKAPV ERCSSSNVAD CTTQTEAAMA KLGTLENFLQ  300
EADNLRLQTL QQMQCILTTR QSARALLAIS DYFSRLRALS SLWIARPQA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462857486
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020405654.11e-116uncharacterized protein LOC542756 isoform X2
SwissprotQ6IVC29e-91TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A1D6G9S01e-117A0A1D6G9S0_MAIZE; Octopine synthase binding factor4
STRINGPavir.Eb03507.1.p1e-113(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2554523
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.22e-79TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]