 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462854230 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
NF-YC |
| Protein Properties |
Length: 286aa MW: 31581.3 Da PI: 9.0837 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462854230 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 61 | 2.5e-19 | 39 | 118 | 19 | 98 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
+++P arikki++adedv +i+ +Pvl+s+a elf+ +l r++ + ++ +tl+ ++++v+r fdfl+++v +
462854230 39 TRFPAARIKKIMQADEDVGKIALAVPVLVSRALELFLQDLIDRTYEITLQSGAKTLNSFHLKQCVKRYSSFDFLTEVVNK 118
689************************************************************************99976 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
KRKKKGKKKA RKEREHDSTR RRRGGCEAAE AKMRKKLGTR FPAARIKKIM QADEDVGKIA 60
LAVPVLVSRA LELFLQDLID RTYEITLQSG AKTLNSFHLK QCVKRYSSFD FLTEVVNKVP 120
DLGGADSCGD ERGLPRRRKS GSDPENDESR SSKMAVRSSL SPRGRGRGRG RGRGRPPTKR 180
KEVGYVQFED ESSMYAEQSE PLPGEDTVLE TNHGNESIPQ STHLPPVEAA PSAPAPATSS 240
KVEEANTDHQ ADWPMPDAIG NIGVGPSGFG HLTVQVDEDE DYDNED
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 3 | 11 | KKGKKKARK |
| 2 | 6 | 22 | KKKARKEREHDSTRRRR |
| 3 | 134 | 138 | PRRRK |
| 4 | 164 | 173 | RGRGRGRGRG |
| 5 | 164 | 174 | RGRGRGRGRGR |
