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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
462853072 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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| Family |
LBD |
| Protein Properties |
Length: 215aa MW: 22818.7 Da PI: 7.8886 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462853072 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 34.4 | 6.2e-11 | 16 | 46 | 1 | 31 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfa 31
+CaaCk +rrkCa+dC+lapyfpa+ +++ a
462853072 16 RCAACKNQRRKCAQDCILAPYFPASGANRGA 46
6***********************9887755 PP
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| 2 | DUF260 | 119.1 | 2.5e-37 | 54 | 154 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
+CaaCk +rrkCa+dC+lapyfpa++p+++a+v+++FGasn+ ++l++lp ++r +a+++++ eA+ r++dPvyG++gvi +lq +++ +++ela+++++
462853072 54 RCAACKNQRRKCAQDCILAPYFPASDPQRYACVQRIFGASNIARMLQSLPVHDRGKAADTMATEAHRRVQDPVYGCAGVIARLQDEIRAVQSELARTEAQ 153
6**********************************************************************************************99987 PP
DUF260 101 l 101
+
462853072 154 I 154
5 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
MSTSDNTAVA ANQGGRCAAC KNQRRKCAQD CILAPYFPAS GANRGAVAAN PGRRCAACKN 60
QRRKCAQDCI LAPYFPASDP QRYACVQRIF GASNIARMLQ SLPVHDRGKA ADTMATEAHR 120
RVQDPVYGCA GVIARLQDEI RAVQSELART EAQIAVHAAA AAGAQPEAGN QLNAQLVQGP 180
MQQQGDSLMV QEPFPGLDGL LDDVHAGATL FDDNI
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