 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462852665 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
G2-like |
| Protein Properties |
Length: 317aa MW: 35722.4 Da PI: 8.0539 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462852665 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 103.3 | 1.5e-32 | 101 | 155 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+rlrWt++LH+rFv+a++qLGG+++AtPk +l +m+v+g+t++hvkSHLQkYRl
462852665 101 KQRLRWTSDLHNRFVDAIAQLGGPDRATPKGVLTVMGVPGITIYHVKSHLQKYRL 155
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MHHMMYHAKS FSVPFAPQRA QNNEHRVVTV DPFLPRVESE RFRASLVACQ YQVMHHMMYH 60
AKSFSVPFAP QRAQNNEHGS NIGAIGGSNI SNPANPVGNG KQRLRWTSDL HNRFVDAIAQ 120
LGGPDRATPK GVLTVMGVPG ITIYHVKSHL QKYRLAKYIP ESPAEGCKEE KKESSDSLSN 180
TDSAPGLQIN EALKMQMEVQ KRLHEQLEVQ RQLQLRIEAQ GKYLQMIIEE QQKLGGSVKA 240
SEDQKLSHSP PRLDDYPDSI QRSPKKPRMD ELSPDSSRDI TQPEFESHLI GPWDQEICGK 300
NICGVAFPLE DSKQTQV
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 7e-22 | 100 | 158 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 7e-22 | 100 | 158 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 7e-22 | 100 | 158 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 7e-22 | 100 | 158 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 7e-22 | 100 | 158 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 7e-22 | 100 | 158 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 7e-22 | 100 | 158 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 7e-22 | 100 | 158 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | FP098418 | 0.0 | FP098418.1 Phyllostachys edulis cDNA clone: bphyem127d16, full insert sequence. |
