 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462851278 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
WRKY |
| Protein Properties |
Length: 325aa MW: 35035.8 Da PI: 9.8646 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462851278 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.6 | 8.2e-31 | 251 | 309 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YYrC+s +Cp++k+ver+++dp+++++tYe++Hnh
462851278 251 ADNYSWRKYGQKPIKGSPHPRGYYRCSSMkDCPARKHVERCRSDPTMLIVTYENDHNHA 309
69************************9988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MAVAAETDDA VARFGKVVAV LSDRLGHARA RVGKRSAPPV DASYLMDRPL KAPCQTPSIG 60
HLVTAPAPPL PATSTTPQSV VMMRSQETEV APAVAVVTPR ANRSLLQCRG VAEEQRKSCR 120
RCSRGEQQQQ QAKAQKSFLF DQTPSAEQFH IEVPVPAARG GGGAKEVISF SFDNNSVCTS 180
SAATSFFNSI NSHLISMSDA ATSSAATGKK ACGKRGEDGG VKCHCPKKKK PRDKRVVRVP 240
AISDKNADIP ADNYSWRKYG QKPIKGSPHP RGYYRCSSMK DCPARKHVER CRSDPTMLIV 300
TYENDHNHAQ PLDPAVLAAN AETCV
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC243252 | 9e-99 | AC243252.2 Panicum virgatum clone PV_ABa094-H10, complete sequence. |
