PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462849714
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 386aa    MW: 40934.9 Da    PI: 8.3909
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462849714genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.26.4e-22289351163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN++L++e+++++ke+++l s++
  462849714 289 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRAEVLKQENSSLRDEVNRIRKEYEELLSKN 351
                89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.9E-29198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.7E-38137264No hitNo description
Gene3DG3DSA:1.20.5.1708.5E-19283348No hitNo description
SMARTSM003383.1E-21289353IPR004827Basic-leucine zipper domain
PfamPF001702.4E-20289351IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.518291354IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.38E-11292348No hitNo description
CDDcd147026.16E-25294344No hitNo description
PROSITE patternPS000360296311IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MGSSGTDTPT KASKPSATQE QQPPATSSTA TPAVYPDWSS FQGYPPIPPH GFFPSPVASS  60
PQGHPYMWGA QPMIPPYGTP PPPYVMYPPG VYAHPSMPPG AHPFAPYAMT SPNGNADASG  120
AAAAAGETDG KASEGKDKSP TKRSKGSLGS LNMLTGKSPT EHGKTSGASA NGAVSQSGES  180
GSESSSEGSE GNSQNDSHHK GSGHEQDGDV RSSQNGVSRS PSEGKLNQTM AIMPMPSTGP  240
VPGPTTNLNI GMDYWGANTA SSTPAVHAKG TLTTVPGAVV PGEQWIQDER ELKRQRRKQS  300
NRESARRSRL RKQAECEELA QRAEVLKQEN SSLRDEVNRI RKEYEELLSK NNSLKEKLGD  360
KQYKTDETGL DNKLQHSGDD VRKKGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1305311RRSRLRK
2305312RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap462849714
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001131383.10.0uncharacterized protein LOC100192709
RefseqXP_008672076.10.0putative bZIP transcription factor superfamily protein isoform X1
RefseqXP_008672077.10.0putative bZIP transcription factor superfamily protein isoform X1
SwissprotB6E1070.0BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLB4FCD10.0B4FCD1_MAIZE; BZIP transcription factor 16
STRINGPavir.Cb01814.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-82basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]