 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462848111 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
NF-YC |
| Protein Properties |
Length: 291aa MW: 31521 Da PI: 11.0858 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462848111 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 38 | 3.5e-12 | 184 | 269 | 13 | 98 |
NF-YC 13 atdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
+ d+ ++P+ar++++++a++d + s +a l+ ka elf+ +++ ++ +a + +++++ +++++v + + f+fl d +p+
462848111 184 VPDMGTCSFPMARVRQLMRAEDDTIRASHDAVFLINKASELFLAKFAENAYRNALKDRKKSIIYDNLSTTVCNQKGFKFLSDFIPQ 269
56778889***************************************************************************997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MAGKKPTPPQ AGAKRKKPQA SGEAGTPKKK KGKKGGEPEI KPQKEATSTK KQQSSGKSEN 60
PAPTPTKKQQ PTSRSENPAP TPTKKQQQSV KSPKSATKQQ SSGKVEKPAS AATTPAPTKK 120
QQKEAKREKQ QVPGGKGKST PTKRKRDGTE PQKEPRSPKR ASGDGEAGTP TPVKKKRKDK 180
KAAVPDMGTC SFPMARVRQL MRAEDDTIRA SHDAVFLINK ASELFLAKFA ENAYRNALKD 240
RKKSIIYDNL STTVCNQKGF KFLSDFIPQR LRAEDALKAA AGANSNKVLE I
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 13 | 33 | KRKKPQASGEAGTPKKKKGKK |
| 2 | 14 | 30 | RKKPQASGEAGTPKKKK |
