PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462847932 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 290aa MW: 31988 Da PI: 9.3216 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32 | 2.8e-10 | 81 | 112 | 3 | 34 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 +k+ rr+++NReAAr+sR+RKka+i+ Le 462847932 81 NDKALRRLAQNREAARKSRLRKKAYIQTLESS 112 6899*************************974 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-8 | 77 | 124 | No hit | No description |
SMART | SM00338 | 5.0E-4 | 79 | 143 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.852 | 81 | 123 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.3E-7 | 82 | 115 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.75E-7 | 83 | 123 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 86 | 101 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 7.3E-11 | 174 | 227 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MGIYDYDRRG RQHPYAAWGG EPFRPDTAVT APQPAATVAF PNMDLTRAEA KLESQAHEDA 60 PPVEEAAPSS DSFGHDDDRP NDKALRRLAQ NREAARKSRL RKKAYIQTLE SSRLKLAQME 120 QELTRVRRQQ GAFVGGRTGE SAMGLTTAPV VDPGAAAFEL DYARWVEEQG RHAVELRAAL 180 HAEAPDPQRH HHQLRALVDA ALAHYDALFA AKSAAARMDA FHVMAGAVGK LAGLASFVEQ 240 ADHLRQQTLR NMHKILTPQQ AARGLLALAD YCQRLRALSS LWAARPREPA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462847932 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT034698 | 3e-58 | BT034698.1 Zea mays full-length cDNA clone ZM_BFb0012B03 mRNA, complete cds. | |||
GenBank | BT038664 | 3e-58 | BT038664.1 Zea mays full-length cDNA clone ZM_BFb0304N24 mRNA, complete cds. | |||
GenBank | EU956720 | 3e-58 | EU956720.1 Zea mays clone 1571658 transcription factor TGA4 mRNA, complete cds. | |||
GenBank | KJ727561 | 3e-58 | KJ727561.1 Zea mays clone pUT5421 bZIP transcription factor (bZIP107) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021314235.1 | 2e-68 | transcription factor TGAL10 | ||||
Swissprot | Q6ZBS8 | 2e-51 | TGL10_ORYSJ; Transcription factor TGAL10 | ||||
TrEMBL | A0A0D3GWW9 | 2e-81 | A0A0D3GWW9_9ORYZ; Uncharacterized protein | ||||
STRING | OBART08G04650.1 | 3e-82 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP29534 | 4 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.5 | 6e-42 | bZIP family protein |
Publications ? help Back to Top | |||
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