PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462845874
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family G2-like
Protein Properties Length: 185aa    MW: 20217.9 Da    PI: 7.5757
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462845874genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like301.1e-091203655
    G2-like 36 mkvkgLtlehvkSHLQkYRl 55
               m+vkgLtl h+kSHLQkYRl
  462845874  1 MGVKGLTLFHLKSHLQKYRL 20
               99*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-8121IPR009057Homeodomain-like
PfamPF143791.2E-2061106IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MGVKGLTLFH LKSHLQKYRL GKQSGKEDSE QTKDASYLLD GQSGVSVSPR VPAQDVKESQ  60
EVKEALRAQM EVQRRLHEQV EVQKRVQIRM DALQKYIDTI LESACKLVTE QFASSGFSIS  120
EPDLPDLSPG GIMCGPNDTL SSSVFNQLSV SSIDSHSPGG KPSPSGIEGP PLLLQKSPEL  180
KRRSS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}.
UniProtTranscriptional activator (PubMed:26586833). Probable component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). Required for female gametophyte development and function (PubMed:15634699). {ECO:0000269|PubMed:15634699, ECO:0000269|PubMed:26586833}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462845874
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002460001.11e-122protein PHR1-LIKE 3
RefseqXP_004956514.11e-121protein PHR1-LIKE 2 isoform X1
RefseqXP_025804279.11e-120protein PHR1-LIKE 2-like
SwissprotQ8LAJ73e-39PHL3_ARATH; Protein PHR1-LIKE 3
SwissprotQ94A574e-39PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBLA0A3L6TDR91e-122A0A3L6TDR9_PANMI; Myb family transcription factor APL-like isoform X1
STRINGSi030441m1e-120(Setaria italica)
STRINGSb02g020690.11e-121(Sorghum bicolor)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.11e-40G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Sanz-Fernández M, et al.
    Screening Arabidopsis mutants in genes useful for phytoremediation.
    J. Hazard. Mater., 2017. 335: p. 143-151
    [PMID:28441590]