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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
412944 |
Common Name | SELMODRAFT_412944 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
Trihelix |
Protein Properties |
Length: 298aa MW: 35429.6 Da PI: 7.3608 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
412944 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 78.7 | 8.4e-25 | 40 | 121 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W +e+++Li++r e+e+++ ++k++k+lWe ++ km++rg++rs+ qCk+kw+nl +ryk + ++ + + ++cp+fd+l+
412944 40 QWGFNETKELIAIRAELEKDFTQTKRNKTLWELIAGKMKDRGYRRSADQCKCKWKNLVNRYKGKELSDPE----NGRQCPFFDELD 121
6999**********************************************************99888887....4678******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MADEMFLAMP LQSLVGGSSA LENLSGGGRK GGKKDDRIPQ WGFNETKELI AIRAELEKDF 60 TQTKRNKTLW ELIAGKMKDR GYRRSADQCK CKWKNLVNRY KGKELSDPEN GRQCPFFDEL 120 DSIFKARLKN AGSKLLLESD GLIRPKKRTK QQQQQQPHLS DDPDNSDEEE EQEEEDPSGG 180 EDDRAVQKKK RKADKERQRA TAEKYRANNM QEVLEEFFQQ QQRMEEQWRE VFERRDRERR 240 DREAEWRQRM ERLEAERRAR EHEWWEREEV RRAQDELRSQ KREELLTALV MRVAQEP*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 233 | 240 | RRDRERRD |