PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | 412738 | ||||||||
Common Name | SELMODRAFT_412738 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 704aa MW: 79646.2 Da PI: 6.8713 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.9 | 1.2e-15 | 385 | 465 | 14 | 98 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 ++lp +++++++ +++ +++++d+sg +W+++ +++ ++ v+++GWk F+ ++L gD++vF+ +++ + +++v +f+ 412738 385 YVMTLPSNYCKKMM--PHGRAEVIVRDRSGHQWRMRWNWTVQP---VIGAGWKAFCVHHELVKGDVLVFQKENSsEMITFRVEIFK 465 5689******9996..446679***************888887...9***********************6654455566666665 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.510.10 | 8.6E-9 | 169 | 214 | No hit | No description |
SuperFamily | SSF56112 | 3.88E-10 | 172 | 214 | IPR011009 | Protein kinase-like domain |
Pfam | PF00069 | 1.7E-7 | 172 | 215 | IPR000719 | Protein kinase domain |
PROSITE pattern | PS00109 | 0 | 199 | 211 | IPR008266 | Tyrosine-protein kinase, active site |
Gene3D | G3DSA:2.40.330.10 | 9.6E-18 | 366 | 466 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.55E-20 | 370 | 465 | No hit | No description |
SuperFamily | SSF101936 | 3.73E-17 | 371 | 465 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 1.7E-5 | 372 | 467 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 11.914 | 372 | 467 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 7.1E-12 | 384 | 466 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 704 aa Download sequence Send to blast |
MYGEEREDVE FEWQFLVCYA VLGPHLQFFT VQINPQEQPF LTPLTLVLNL YQAPWNVCCH 60 RSRTDIERDM SSLMLTHDGV LKVIWNWNDS CNEWGVNCED VFQAYTLAPK CGKHLVGSVE 120 GPKFRTRSEC EQLLNPVSWT ADRDSSAKKR RTIRSDAPGA YMVMTVPLLA VREPVSEDEL 180 RQMVLGIRKA LKALHGAGLV HRDIRPANVL YDYERRKLIW KACAQQGWKM LGRAMGEFPH 240 DEAFQALVGK SYNTAEGVLN DEWLRVIGSA HPSKSPRLPL KWSKDHETES DGYWKDTSIF 300 VRECWPSDGA NPTAQDHSSL GRSYEEDSPL SSYIPSNQQR QRRNREELPG SHEALQAAQE 360 YQQHLAKKSR STIKVLNQCC VSGTYVMTLP SNYCKKMMPH GRAEVIVRDR SGHQWRMRWN 420 WTVQPVIGAG WKAFCVHHEL VKGDVLVFQK ENSSEMITFR VEIFKRRKLV KSSDRANAAN 480 IVLLPPKKEP DALEIEIEEL GGVANGGDVH DYDVLERNPK RTRGLLRGEW VENSHSCNQE 540 GQRHVGPVVH DHCAIGELAA LEDLNVESYR LGGDVLLLED EHVPLDEFVM DAECFPSGTN 600 HWLHRPVPFH HPLVATLVAD EDRGSPPRHH LLAVVRRKSL RKKKNEESGE DICYDCSLGA 660 VAGTPARLGV LPANRAAARD SDAAAADWRG CNSAEDCLPR KNL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | D8RLB4 | 0.0 | D8RLB4_SELML; Uncharacterized protein | ||||
STRING | EFJ27102 | 0.0 | (Selaginella moellendorffii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G42700.1 | 5e-08 | B3 family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | 412738 |
Entrez Gene | 9640612 |
Publications ? help Back to Top | |||
---|---|---|---|
|