PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 412738
Common NameSELMODRAFT_412738
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family B3
Protein Properties Length: 704aa    MW: 79646.2 Da    PI: 6.8713
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
412738genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.91.2e-153854651498
             T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS
      B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 
               ++lp +++++++  +++  +++++d+sg +W+++ +++ ++   v+++GWk F+  ++L  gD++vF+ +++ +  +++v +f+
  412738 385 YVMTLPSNYCKKMM--PHGRAEVIVRDRSGHQWRMRWNWTVQP---VIGAGWKAFCVHHELVKGDVLVFQKENSsEMITFRVEIFK 465
             5689******9996..446679***************888887...9***********************6654455566666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.510.108.6E-9169214No hitNo description
SuperFamilySSF561123.88E-10172214IPR011009Protein kinase-like domain
PfamPF000691.7E-7172215IPR000719Protein kinase domain
PROSITE patternPS001090199211IPR008266Tyrosine-protein kinase, active site
Gene3DG3DSA:2.40.330.109.6E-18366466IPR015300DNA-binding pseudobarrel domain
CDDcd100171.55E-20370465No hitNo description
SuperFamilySSF1019363.73E-17371465IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.7E-5372467IPR003340B3 DNA binding domain
PROSITE profilePS5086311.914372467IPR003340B3 DNA binding domain
PfamPF023627.1E-12384466IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    Send to blast
MYGEEREDVE FEWQFLVCYA VLGPHLQFFT VQINPQEQPF LTPLTLVLNL YQAPWNVCCH  60
RSRTDIERDM SSLMLTHDGV LKVIWNWNDS CNEWGVNCED VFQAYTLAPK CGKHLVGSVE  120
GPKFRTRSEC EQLLNPVSWT ADRDSSAKKR RTIRSDAPGA YMVMTVPLLA VREPVSEDEL  180
RQMVLGIRKA LKALHGAGLV HRDIRPANVL YDYERRKLIW KACAQQGWKM LGRAMGEFPH  240
DEAFQALVGK SYNTAEGVLN DEWLRVIGSA HPSKSPRLPL KWSKDHETES DGYWKDTSIF  300
VRECWPSDGA NPTAQDHSSL GRSYEEDSPL SSYIPSNQQR QRRNREELPG SHEALQAAQE  360
YQQHLAKKSR STIKVLNQCC VSGTYVMTLP SNYCKKMMPH GRAEVIVRDR SGHQWRMRWN  420
WTVQPVIGAG WKAFCVHHEL VKGDVLVFQK ENSSEMITFR VEIFKRRKLV KSSDRANAAN  480
IVLLPPKKEP DALEIEIEEL GGVANGGDVH DYDVLERNPK RTRGLLRGEW VENSHSCNQE  540
GQRHVGPVVH DHCAIGELAA LEDLNVESYR LGGDVLLLED EHVPLDEFVM DAECFPSGTN  600
HWLHRPVPFH HPLVATLVAD EDRGSPPRHH LLAVVRRKSL RKKKNEESGE DICYDCSLGA  660
VAGTPARLGV LPANRAAARD SDAAAADWRG CNSAEDCLPR KNL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD8RLB40.0D8RLB4_SELML; Uncharacterized protein
STRINGEFJ271020.0(Selaginella moellendorffii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.15e-08B3 family protein
Publications ? help Back to Top
  1. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]