PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 403897
Common NameSELMODRAFT_403897
Organism
Selaginella moellendorffii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
Family SAP
Protein Properties Length: 871aa    MW: 96299.7 Da    PI: 9.189
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
403897genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP303.45.6e-93775285446
     SAP   5 sssssseseegseggeggdass..gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrltrriWrrt. 104
             ssss + ++++ ++ + g++ss      +++   +  a   +pe ++ea+a++ a  a+r +G +aa+++la +fqvcs wr+vs+s+llw++  + +W  + 
  403897  77 SSSSPAPQDSSISRWSRGESSSapRRLSAAAMVESGGAAAFLPESVVEAVAVEAAAAAARAHGAMAASRTLACIFQVCSVWRSVSQSELLWENAFNVVWPTQa 179
             33333333333233333333322333444444555577889**********************************************************8763 PP

     SAP 105 kllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrlGrfsravsGivis 207
             ++ +  Wr e+   h ta+nfr++r +++ l  +++        +    r la+s+ yl  G  dGa+r+fdl+t++ v t+++++++ +G++sra++Gi ++
  403897 180 RQPERSWRREFQRAHTTASNFRRGRARHTILVEEET---GG--RHYEPPRSLAISNDYLVGGHFDGALRVFDLKTKACVWTLRANQEEGFGPLSRAIAGISLQ 277
             77889***********************99876665...33..345678****************************************************** PP

     SAP 208 dsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrv 310
                +vf ++dG++++a       ++  r+++G v++dGal+ fa s+rWw+ lyaG  G+ f++Wda t++ v+ GG +td +a++GWhml e +  vGrvr+
  403897 278 GDDIVFGSVDGNVFTASASR---GNRVRVHVGRVIQDGALISFAASQRWWIALYAGSVGHCFRLWDAATKQVVYRGGNMTDDDAMRGWHMLVERAGRVGRVRI 377
             ***************98776...57889*************************************************************************** PP

     SAP 311 teretavaCtslrlvvfdlrnqgv..vlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg.............aqrgvlgCvnggya 398
              ++e  va  ++r+ v dl  +g+  +++ ++e++   v ++d+  + ++ +  +G a++r   ++ ev   r  g             ++++++g +n    
  403897 378 VNEELLVAANRRRIRVHDLGTHGMplIVERDQEAENNAVEAMDVRGNKLLSASYEGLARIRELPTMVEVLTVRHAGvhanprlrpddreQMQQLFGTLNSRQL 480
             *******************9997532555566668899*************************99988866553322112111112233456899******** PP

     SAP 399 lvyaggvlrvWeiekkegylyslrervg.evnalvaddrhvavsssdgt 446
              ++ +g + +W+  + e  lyslre +g   n +va+d  +a+ +  + 
  403897 481 FLCFSGAVNAWDCSSGE-HLYSLREETGyMYNDMVASDSCLALGAVRSE 528
             *************9976.9*********7789******99998776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813831.13E-5145194IPR001810F-box domain
Gene3DG3DSA:1.20.1280.502.1E-7145218No hitNo description
SuperFamilySSF509984.24E-16201513IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.105.5E-9219336IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.101.5E-5337551IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 871 aa     Download sequence    Send to blast
MAFLTGPQIG QTYGRHTYHR DTPSVKMRQP DRPASSLPNT AATTTSSTSR RGDNGQELPE  60
EGQGARDYRH SSAAEPSSSS PAPQDSSISR WSRGESSSAP RRLSAAAMVE SGGAAAFLPE  120
SVVEAVAVEA AAAAARAHGA MAASRTLACI FQVCSVWRSV SQSELLWENA FNVVWPTQAR  180
QPERSWRREF QRAHTTASNF RRGRARHTIL VEEETGGRHY EPPRSLAISN DYLVGGHFDG  240
ALRVFDLKTK ACVWTLRANQ EEGFGPLSRA IAGISLQGDD IVFGSVDGNV FTASASRGNR  300
VRVHVGRVIQ DGALISFAAS QRWWIALYAG SVGHCFRLWD AATKQVVYRG GNMTDDDAMR  360
GWHMLVERAG RVGRVRIVNE ELLVAANRRR IRVHDLGTHG MPLIVERDQE AENNAVEAMD  420
VRGNKLLSAS YEGLARIREL PTMVEVLTVR HAGVHANPRL RPDDREQMQQ LFGTLNSRQL  480
FLCFSGAVNA WDCSSGEHLY SLREETGYMY NDMVASDSCL ALGAVRSERP LFDSEVGAWR  540
IDRQQTVRKC ESMQVPSLRF TDHLQKARIA HINIWFVIGE TGERGWTTKE EIRLCIAVIE  600
KGREVFLSRG VNLLLPDTLV SSNSTSPALT PFVFWGRLVL FSNRRFRSSR YVCAANTNGN  660
VVMRIRASQL HVNAKKRHML QLAALVTASL VNGSNAGKAN RMCSMPSCLA DHMLGFSHSC  720
PTGWELFQFP QSVSIVSAAH REGLFFLGVY RQNRSDLTGR TKEISATTTC MNDFSSAEWS  780
TLWSSKSATA SIQANTKVNL NAFIRCTLHR HHTARRWLLL GTRGGHLDRV AESIVAIDSE  840
FTSKSLAPGT KEIEYLSFRE SGALCDDNLD *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024539571.10.0transcriptional regulator STERILE APETALA
TrEMBLD8QSX20.0D8QSX2_SELML; Uncharacterized protein
STRINGEFJ375130.0(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9756912
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.17e-52SAP family protein
Publications ? help Back to Top
  1. Banks JA, et al.
    The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
    Science, 2011. 332(6032): p. 960-3
    [PMID:21551031]