|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
402580 |
Common Name | SELMODRAFT_402580, SELMODRAFT_408289 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
|
Family |
Trihelix |
Protein Properties |
Length: 284aa MW: 32134 Da PI: 8.7602 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
402580 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 55.9 | 1.1e-17 | 29 | 113 | 2 | 81 |
trihelix 2 WtkqevlaLiearremeerlr.....rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81
Wt +e++ Li+a++ ++er rgk ++ +W++v +++++ g++rs++qC++kw+nl ++ykk+++ e k +++++s +++
402580 29 WTFHETMILITAKKLDDERRAkggdkRGKCAEYRWKWVENYCWKNGCQRSQNQCNDKWDNLLRDYKKVRDYETKIQPGQQSYWQL 113
**************888888833333468999*******************************************9999988864 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MAADCTAIIP FDEAGEGSER PREYRKGNWT FHETMILITA KKLDDERRAK GGDKRGKCAE 60 YRWKWVENYC WKNGCQRSQN QCNDKWDNLL RDYKKVRDYE TKIQPGQQSY WQLEKHERKE 120 RGLPSSLMIQ IYDALHDIVD KRLPSSSSRL MAASDKAHTT SYLPLPPQST ASRSSGSSEQ 180 LGDPKSPAKK RKSSSRDHHQ QDVEGLAPAV ARSASDLSHT LMQCEEKKDR RHKDLLSVEE 240 RKLMLEETKT EISRQGIEGL VGAVNNLANA ILTLASERGG SGE*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 183 | 191 | PKSPAKKRK |