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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 39427 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family | bZIP | ||||||||
Protein Properties | Length: 85aa MW: 10273 Da PI: 11.5244 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 51.6 | 2.1e-16 | 4 | 46 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r+rr++kNRe+A rsR+RK+a++ eLe +v +L++eN++L+k 39427 4 RRQRRMIKNRESAARSRARKQAYTVELEAEVTQLKEENMKLRK 46 69***************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 10.932 | 2 | 46 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 7.8E-11 | 2 | 64 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.74E-18 | 4 | 49 | No hit | No description |
Pfam | PF00170 | 4.1E-14 | 4 | 46 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.38E-12 | 4 | 46 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-16 | 4 | 47 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 7 | 22 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence Send to blast |
IVERRQRRMI KNRESAARSR ARKQAYTVEL EAEVTQLKEE NMKLRKMQVR NEFFLRDFSQ 60 QALEVITPMT QHLPKMLKRT LTGPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024537960.1 | 4e-42 | bZIP transcription factor 46 isoform X1 | ||||
Swissprot | Q6ZDF3 | 2e-24 | TRAB1_ORYSJ; bZIP transcription factor TRAB1 | ||||
TrEMBL | D8R121 | 2e-40 | D8R121_SELML; Uncharacterized protein ABI5C-1 | ||||
TrEMBL | D8S186 | 3e-40 | D8S186_SELML; Uncharacterized protein ABI5C-2 | ||||
STRING | EFJ21671 | 6e-41 | (Selaginella moellendorffii) | ||||
STRING | EFJ33828 | 4e-41 | (Selaginella moellendorffii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP10063 | 7 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 6e-23 | abscisic acid responsive elements-binding factor 2 |
Link Out ? help Back to Top | |
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Phytozome | 39427 |
Publications ? help Back to Top | |||
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