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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
344050 |
Common Name | ARALYDRAFT_344050 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 544aa MW: 61826.7 Da PI: 8.3364 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
344050 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 43.2 | 7.2e-14 | 21 | 97 | 10 | 96 |
HHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 10 vlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
++++ l +p f+ +h g++ +++t l++ s +W+vk+ ++++ l++GW++F a++L++gD+vvF+ +e+elv++v
344050 21 GFTNH-LDIPVAFFLKHlvGSN--KGTTAELRSdASEMTWRVKI--DGRR----LSNGWEDFTVAHDLRVGDIVVFR----QEGELVFHV 97
56666.9**********98767..5557777765999*******..9998....***********************....556667766 PP
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2 | B3 | 62.4 | 7.6e-20 | 152 | 244 | 3 | 97 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
+++++++lk++ +++pk fa ++ + ++++++l++e+g+sW++ l+ + + gr+++++GW++F+ ang k gD++ Fkl++ +e+++v+++f
344050 152 VATVTASNLKRDTVYIPKGFALSNHLM--NKFQIVLMNEEGESWKIDLRReTYSHGRFYMRRGWRSFCIANGKKPGDSFAFKLVE-NEETPVLQLF 244
567899***************999666..4578***************885666667**************************98.5555888876 PP
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3 | B3 | 62.3 | 7.9e-20 | 278 | 366 | 4 | 95 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
+++++++l+++rl+lpk+f+ ++g+ ++++++l++e+g+sW++ ++++ +sgr++ +GW++F+ ang k gD + Fkl + +e+++v++
344050 278 ATVTASNLSRDRLYLPKTFIMSNGLL--KKFQMRLMNEEGESWTIDMKHEAHSGRFLTIRGWRSFCVANGKKPGDLFEFKLGQ-NEETPVLQ 366
567999*****************998..4568************************999*********************977.55557665 PP
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4 | B3 | 42.3 | 1.3e-13 | 457 | 542 | 10 | 99 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
+ s+ l lp +f++ +g++k++ ++t+ d+ +W l ++k++ ++ l++G k+F++ ng+k ++++v++l++ +++ +++k+++k
344050 457 LTPSSKLNLPVEFIKGNGINKAG--KITMLDRYDAKWPTSLLMDKRG-TMSLGRGSKGFCEVNGVKMNESFVLELIW-EDTVPLLKFCSK 542
55567799**********99887..7***************766665.678**************************.788899999987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 544 aa
Download sequence Send
to blast |
MADPPLYSPI NPHFFQPLLP GFTNHLDIPV AFFLKHLVGS NKGTTAELRS DASEMTWRVK 60 IDGRRLSNGW EDFTVAHDLR VGDIVVFRQE GELVFHVSAL GPSCCEIQYR DNYPEEDKIE 120 KLCDTEKVSR KKNSLKREAD SAPEHSLGSC FVATVTASNL KRDTVYIPKG FALSNHLMNK 180 FQIVLMNEEG ESWKIDLRRE TYSHGRFYMR RGWRSFCIAN GKKPGDSFAF KLVENEETPV 240 LQLFPMTIED LDKLQSVPRE KSRKVEAPPS PDPSSFVATV TASNLSRDRL YLPKTFIMSN 300 GLLKKFQMRL MNEEGESWTI DMKHEAHSGR FLTIRGWRSF CVANGKKPGD LFEFKLGQNE 360 ETPVLQLVPL NSEDLHKLEP NNDTRQGKCL EATKKEFLCL QATKKKFLGE EVYRNDSFKA 420 IDEDIRKGQC SKAIKQEYVS TEENNSTSQN RFVTLTLTPS SKLNLPVEFI KGNGINKAGK 480 ITMLDRYDAK WPTSLLMDKR GTMSLGRGSK GFCEVNGVKM NESFVLELIW EDTVPLLKFC 540 SKV*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC007266 | 1e-112 | AC007266.5 Arabidopsis thaliana chromosome 2 clone F27A10 map mi238, complete sequence. |
GenBank | CP002685 | 1e-112 | CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence. |