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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
331130 |
Common Name | ARALYDRAFT_331130 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 212aa MW: 24210.7 Da PI: 10.3141 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
331130 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 56.4 | 5.3e-18 | 110 | 197 | 1 | 94 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
f+k +++s+v+ +l lp +f+++h gk+ + +tl de+g+++e + rk++ l++GW +F+ a++L gD++vF+l++r+ f+ ++
331130 110 FVKSMLQSHVSGGFWLGLPVQFCRSHLGKQ--DGVITLIDEEGEEYETIYLARKNG----LSGGWMGFAIAHNLAYGDTLVFELVRRTAFKIYI 197
89************************6663..448***************667776....*************************999995544 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MVVSKQSKYE EFRLKRVEEN KKRMEALNLQ KLSQNLNSTS VKNSPMKKRS IPRTPEKQMV 60 DVQRIQIRRR GLSKRRDLSN RVYISEEIRE EAFSRAEKFQ DELGSGHPSF VKSMLQSHVS 120 GGFWLGLPVQ FCRSHLGKQD GVITLIDEEG EEYETIYLAR KNGLSGGWMG FAIAHNLAYG 180 DTLVFELVRR TAFKIYITRV GSSGESSKDM S*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB007647 | 8e-86 | AB007647.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB21. |
GenBank | CP002688 | 8e-86 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |