|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
323305 |
Common Name | ARALYDRAFT_323305 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
|
Family |
B3 |
Protein Properties |
Length: 276aa MW: 31839.6 Da PI: 8.2181 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
323305 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 36.1 | 1.1e-11 | 17 | 104 | 13 | 95 |
TT-EE--HHH.HTT.........---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 13 sgrlvlpkkfaeeh.........ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
r+++p++ a+++ +g k+ ++++t+++ +sg+ W++++ + ++++++l++GWk+ vk+ ++ e f+ +++dg+ f ++
323305 17 FFRVYIPNQTADDMnlplvldkiSG-KPLPRKVTVKSvSSGNIWRMEM--KANGDTVFLRDGWKRIVKDENVTETIFLELEFDGSGVF--HFC 104
5689999999999999999999744.45999******9999*******..************************99999999887666..444 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MEENSSQNEL LDTVQKFFRV YIPNQTADDM NLPLVLDKIS GKPLPRKVTV KSVSSGNIWR 60 MEMKANGDTV FLRDGWKRIV KDENVTETIF LELEFDGSGV FHFCVYEYGS MCKRMRSPME 120 KEVIKVDSTE EEIEEDVLVD DEESTKGLEE SPRRGGTSRR RENLKTDSHK FYEHLGNKLN 180 PSFPVDMTQS RTRIPSLLIK DYNLTFPNMV IVRDKIGILK RRIAVWKNKS VYLNGISSII 240 RRNHVKPGDE MVFELKMVNG YHGLVHEIKV HIIKA*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AL096859 | 1e-124 | AL096859.2 Arabidopsis thaliana DNA chromosome 3, BAC clone T6H20. |
GenBank | CP002686 | 1e-124 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |