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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
318465 |
Common Name | ARALYDRAFT_318465 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 303aa MW: 35675.2 Da PI: 10.473 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
318465 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 55.3 | 1.2e-17 | 21 | 114 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
ffk++ +sd +++++ ++ +f+++ + k s +++++ ++g++W +++ +k+++ y+++ +GW +Fv++n L e++f++F++ g++ f +v +++
318465 21 FFKIFQSSDLSSECMRAFSYSFISRLS-RKDFSYKMVIRAQWGKTWHLEI--SKNPRYYYIErRGWDQFVSDNALGENEFITFTHRGNMVF--HVNIYE 114
99*********************9985.456999****************..9***99665549********************9999999..888876 PP
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2 | B3 | 32.8 | 1.2e-10 | 210 | 286 | 13 | 94 |
TT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
B3 13 sgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
++ l +pk+f+++h +++sk t+++++g sW+v + + r+++++G ++ +++ L +gD ++Fkl++ fe+v+
318465 210 LKFLAIPKHFVDDHI--PNKSKFFTVRHPNGiGSWKVLC--LVREIRTIFSGGYSKLAREYPLMVGDKCTFKLIK--PFEFVL 286
35699******9995..446778999*****9*******..8888899************************987..555555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 303 aa
Download sequence Send
to blast |
MGRRRNIGFD KIIEERKMLS FFKIFQSSDL SSECMRAFSY SFISRLSRKD FSYKMVIRAQ 60 WGKTWHLEIS KNPRYYYIER RGWDQFVSDN ALGENEFITF THRGNMVFHV NIYEQNGVEM 120 LTPRKFQTMD SSSGIKKEGE SSFKDVKKEE ETDESAGRAE FVVRKRKTEE SKSSKKKMER 180 KKKKSKSKSK SKEVLNGVPE FKITIRKSYL KFLAIPKHFV DDHIPNKSKF FTVRHPNGIG 240 SWKVLCLVRE IRTIFSGGYS KLAREYPLMV GDKCTFKLIK PFEFVLLTSK KTRDEIDHYM 300 ID*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 164 | 183 | KRKTEESKSSKKKMERKKKK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB493618 | 0.0 | AB493618.1 Arabidopsis thaliana At3g17010 mRNA for hypothetical protein, partial cds, clone: RAAt3g17010. |