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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
317484 |
Common Name | ARALYDRAFT_317484 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 176aa MW: 19524.4 Da PI: 3.9635 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
317484 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 55 | 1.5e-17 | 16 | 98 | 8 | 96 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
s+v+++++ +p+ + eh ++ +kt +l+ + gr W+v + k++++++++GW +Fv +n+Lk+g+f++F +dg+++ v++
317484 16 SNVSSNSLKLIPRVYY-EH-LPRWLPKTAILTGTGGRFWKVAM--MSKREQVYFEQGWGNFVADNDLKDGEFLTFVFDGHKSY--EVSI 98
7888999999999999.55.3567999****************..999999*************************9987655..5555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MASGDVLPRF YTVFLSNVSS NSLKLIPRVY YEHLPRWLPK TAILTGTGGR FWKVAMMSKR 60 EQVYFEQGWG NFVADNDLKD GEFLTFVFDG HKSYEVSIYG RGECKETRAV IQVEEISDET 120 ESDNDSLGSL VDVTPMPVEE NSDDTEGDND SGDSVVDVTP MPVEEISDAS ENDSS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB493604 | 0.0 | AB493604.1 Arabidopsis thaliana At3g06220 mRNA for hypothetical protein, partial cds, clone: RAAt3g06220. |
GenBank | DQ446640 | 0.0 | DQ446640.1 Arabidopsis thaliana clone pENTR221-At3g06220 transcriptional factor B3 family protein (At3g06220) mRNA, complete cds. |
GenBank | DQ653069 | 0.0 | DQ653069.1 Arabidopsis thaliana clone 0000017013_0000011937 unknown mRNA. |