 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
30700 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
|
| Family |
AP2 |
| Protein Properties |
Length: 346aa MW: 37132.3 Da PI: 10.3091 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 30700 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 30.3 | 1.1e-09 | 141 | 186 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
s y+GV+ +++g++ A+I + rk+ +lg f ++eeAa+a+++a+
30700 141 SLYRGVSLLRQTGKYHAQINVQ-----RKQLHLGFFFSEEEAARAYDRAAI 186
57******************93.....5*********************96 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MGAYTYDSAT HGPPIGVPRT IGKARTTARG DDAEGDSGSG RSSDAPLSVN VFGGGTQFAR 60
SSPSESEVGT PGRGMEAPRN GTATARPRGR ASSGSKSPTD LSETDSEQSN TGKGDGANKL 120
VHKDLVTNLK AQARRHDSRT SLYRGVSLLR QTGKYHAQIN VQRKQLHLGF FFSEEEAARA 180
YDRAAIFKAS VEGGTICTNM DINDYKDEIP TLQAMTQPEL LQMLHEMKLK SNESSAPNSP 240
RKGIKPRTST NSKQMARENR LDRSNSGSIE HVIIKANSQE PPTSPRFDAL NSAVGVVERE 300
QQGTLSVVNV AASVTVQHTC PGVIDLHISK RRRTRIQPRQ APAAA*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | CP000583 | 0.0 | CP000583.1 Ostreococcus lucimarinus CCE9901 chromosome 3, complete sequence. |
