 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
30174.m008627 |
| Common Name | RCOM_1616000 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
|
| Family |
MYB_related |
| Protein Properties |
Length: 279aa MW: 31974.9 Da PI: 7.38 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 30174.m008627 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 22.3 | 3e-07 | 174 | 223 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
+++WT+eE++++ v+ ++ W+ I + + ++ +++++s+++++
30174.m008627 174 KLSWTKEEEKKFEAIVRSNPPSldkcFWDEIFKFFS-TKRREDLVSYYFNV 223
689*****************88**************.***********996 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MHPCMYDDHV GSVYNFRERL RCSKGLPSGI TLSQAQAYSK LPSSTTENDS NSSTKGCSSD 60
YPSTEYSLLD LPVEKTIPLG PDFQAEIPEW TGVVCESDSK WIGARVWPPE KMDNRFVVER 120
EPIGKGRQDS CGCEVPKSVE CVRFHTTERR MKMKREVGVA FYHWRFDKMG EDVKLSWTKE 180
EEKKFEAIVR SNPPSLDKCF WDEIFKFFST KRREDLVSYY FNVFLMQRRA HQNRFTPNNI 240
DSDDDESECG VAPNSSGREA PKSPGSLLYS AKKSHKSGK
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 148 | 154 | RRMKMKR |
| 2 | 148 | 155 | RRMKMKRE |
