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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
30171.m000418 |
| Common Name | LOC8266514, RCOM_1604380 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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| Family |
MYB_related |
| Protein Properties |
Length: 468aa MW: 51784.6 Da PI: 5.6898 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 30171.m000418 | genome | JCVI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 52.2 | 1.4e-16 | 39 | 83 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r rWT+eE++++++a k++G W++I +++g ++t+ q++s+ qk+
30171.m000418 39 RERWTEEEHKKFLEALKLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 83
78******************88.*********.************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009734 | Biological Process | auxin-activated signaling pathway |
| GO:0010600 | Biological Process | regulation of auxin biosynthetic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MSLNAGLHNV TGPQLKEQFS CGSDYSPKAR KPYTITKQRE RWTEEEHKKF LEALKLYGRA 60
WRRIEEHVGT KTAVQIRSHA QKFFSKVVRE GSGSSTSAVE PIEIPPPRPK RKPMHPYPRK 120
MAHPLNKELS ITEQPLRSSS PNFSISEQEN QSPTSVLSAV GSDVLGSTDS NPPNCSSSPM 180
SCAGGSHLDD FQICEPNSAP ENNESPSPAP ATAEAHDEQS LKVQKLELFP EENAFAEEGV 240
GEETSTRSLK LFGKTVLVNE CNRPSSPANG SPTLDTNDEK PVQPLPWKPM AIELQLGNGE 300
CNWSNLPQGP PGSLCYLQLQ KENSNSGEVG SATPFPWWAF YGGMPYPFIP CHKQEPATEE 360
HLDSSGEDIQ YKEIQKEGSW TGSNSGSVNE GENADKNMDG ETESRHFSCE VKELYPVLEL 420
KTSVKTASTN KCMKGFVPYK KRTAVERDSQ SSSITGEERE ERKIRLCL
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