PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30169.m006395
Common NameRCOM_1576950
Organism
Ricinus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family EIL
Protein Properties Length: 631aa    MW: 70866.5 Da    PI: 5.5756
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30169.m006395genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3431.86.6e-132533971319
                    XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
           EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 
                    eel++rmwkd+++lkr+ker+k    +++ a++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWWk
  30169.m006395  53 EELERRMWKDRIKLKRIKERQKLA--AQQ-AAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWK 145
                    8****************9999963..355.599*************************************************************** PP

                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--. CS
           EIN3  97 ekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgt 192
                    ekv+fd+ngpaai+ky+a++l+++++++   ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww +lgl++ q+ 
  30169.m006395 146 EKVKFDKNGPAAIAKYEAECLAMDEAEKG--RNGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEEWWVKLGLPQGQS- 238
                    ************************99988..6899999********************************************************9. PP

                    -----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XXXX..XXXXXXXX CS
           EIN3 193 ppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........slrk..qspkvtls 277
                    p ykkphdlkk+wkv+vLtavikhmsp+ ++ir+++rqsk+lqdkm+akes+++lsvln+ee+++++ s+++             +  ++++  +s
  30169.m006395 239 PLYKKPHDLKKMWKVGVLTAVIKHMSPDTAKIRRHVRQSKCLQDKMTAKESAIWLSVLNREESLIQQPSSDNGtsgitempqG--RcvGKKRPAIS 332
                    9**********************************************************************444567766531..1468999999* PP

                    XXXXXXXXXXXXXX.XXXXXXXXXX.......................XXXXXXXXXXXXXXXXX CS
           EIN3 278 ceqkedvegkkeskikhvqavktta.......................gfpvvrkrkkkpsesak 319
                    +++++dv+  ++   + ++++++++                           + +rk+++++s++
  30169.m006395 333 SDSDYDVDAVDDGMGSVSSKDNRRNtpveveplrsvqndipraiqdkePQGKQPRRKRPRGRSTA 397
                    ********666666677777777767777777777777777777764422233334444444443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.6E-12553300No hitNo description
Gene3DG3DSA:1.10.3180.104.8E-70176308IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.75E-60181303IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    Send to blast
MGEFEDLGAE IRGLKQYLMF AYLLADSSDI EVDDIRCDNI TEKDVSDEEI ESEELERRMW  60
KDRIKLKRIK ERQKLAAQQA AEKQKPKQTS DQARRKKMSR AQDGILKYML KLMEVCKARG  120
FVYGIIPEKG KPVSGASDNI RAWWKEKVKF DKNGPAAIAK YEAECLAMDE AEKGRNGNSQ  180
SVLQDLQDAT LGSLLSSLMQ HCDPPQRKYP LEKGVPPPWW PTGNEEWWVK LGLPQGQSPL  240
YKKPHDLKKM WKVGVLTAVI KHMSPDTAKI RRHVRQSKCL QDKMTAKESA IWLSVLNREE  300
SLIQQPSSDN GTSGITEMPQ GRCVGKKRPA ISSDSDYDVD AVDDGMGSVS SKDNRRNTPV  360
EVEPLRSVQN DIPRAIQDKE PQGKQPRRKR PRGRSTADQQ SGPLLNEHSL AEQRNTLPDI  420
NHDNLSLGEY QINGSEREND TATGVRALEN GLEGRTDLVP SEFDYFNAIP SANDGAVGNM  480
HVDGRSMMYP DLQNSELHHE NPYNIYNQSV EYQPSHDGRM SQTTIAAPQI GTQNDRGHIQ  540
ALHSDGNEIV GGDLHHPFSS ELPFGSPLNN LSLDYGAISS PYMDIDFLLS EEDMIQCFGM  600
ARNAASLYVA IPDVIICAYP DFGQSFPQRD N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A3e-771803119140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap30169.m006395
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015571332.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLB9RI800.0B9RI80_RICCO; ETHYLENE-INSENSITIVE3 protein, putative
STRINGXP_002513449.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-179ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]