 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
30147.m014198 |
| Common Name | RCOM_1499980 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
|
| Family |
MYB_related |
| Protein Properties |
Length: 188aa MW: 21603.7 Da PI: 4.7307 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 30147.m014198 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 32.2 | 2.5e-10 | 12 | 35 | 23 | 47 |
-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
W++Ia++++ gRt++++k++w+++
30147.m014198 12 KWSKIAARLP-GRTDNEIKNHWNTH 35
6*********.************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MEYFGGSDIA TKWSKIAARL PGRTDNEIKN HWNTHIKKKL IKMGIDPVTH EPLNKQVNPQ 60
ELVPYDHHSS NNSHDHRDQK LPKTNNCDHS SSSDNSSTPP ENCSIDECRS TNPNSDDDPL 120
MNYILSETFL EDSTWNFPMT REEYCEFGKS SSSEGNSPWL LDLKNIEDDH HFGFLDCFSE 180
MDLKMLDL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KM034733 | 1e-38 | KM034733.1 Jatropha curcas clone JcMYB113 MYB family protein gene, complete cds. |
