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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
30138.m004055 |
Common Name | LOC8263409, RCOM_1471540 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family |
NAC |
Protein Properties |
Length: 361aa MW: 40814.2 Da PI: 8.1076 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
30138.m004055 | genome | JCVI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 180.6 | 3.9e-56 | 16 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96
lppGfrFhPtdeel+++yL kkv + +++ ++i +vd++k+ePw+Lp k+k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ +
30138.m004055 16 LPPGFRFHPTDEELISHYLYKKVLDISFSS-RAIGDVDLNKSEPWELPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR-G 109
79*************************999.89***************888999****************************************.9 PP
NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129
++lvg+kktLvfykgrapkgekt+Wvmheyrle
30138.m004055 110 KSLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 142
99*****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MENISGLVKE DDQMDLPPGF RFHPTDEELI SHYLYKKVLD ISFSSRAIGD VDLNKSEPWE 60 LPWKAKMGEK EWYFFCVRDR KYPTGLRTNR ATEAGYWKAT GKDKEIYRGK SLVGMKKTLV 120 FYKGRAPKGE KTNWVMHEYR LEGKYSIHNL PKTAKNEWVI CRVFQKSSGG KKTHISGLVR 180 LGSFGNELAP TVLPPLMDSS PYTGKTKPVA ESAYVPCFSN PIDIQRNQQE SIDTAFNHHQ 240 LLSVSSNSCD IFPRFPFPNS FYSTQSLPLS ANLQYPSSGS IPENSILRVL VENQGSNVKQ 300 QSFKTEREMI SASQETGLTT EMNTEISSVI SNLEMGKRPF DDQGLPSTCG GAVDLDCLWN 360 Y
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-55 | 8 | 172 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-55 | 8 | 172 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-55 | 8 | 172 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-55 | 8 | 172 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-55 | 8 | 172 | 9 | 174 | NAC domain-containing protein 19 |
3swm_B | 9e-55 | 8 | 172 | 9 | 174 | NAC domain-containing protein 19 |
3swm_C | 9e-55 | 8 | 172 | 9 | 174 | NAC domain-containing protein 19 |
3swm_D | 9e-55 | 8 | 172 | 9 | 174 | NAC domain-containing protein 19 |
3swp_A | 9e-55 | 8 | 172 | 9 | 174 | NAC domain-containing protein 19 |
3swp_B | 9e-55 | 8 | 172 | 9 | 174 | NAC domain-containing protein 19 |
3swp_C | 9e-55 | 8 | 172 | 9 | 174 | NAC domain-containing protein 19 |
3swp_D | 9e-55 | 8 | 172 | 9 | 174 | NAC domain-containing protein 19 |
4dul_A | 9e-55 | 8 | 172 | 6 | 171 | NAC domain-containing protein 19 |
4dul_B | 9e-55 | 8 | 172 | 6 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |