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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
30138.m003913 |
| Common Name | LOC8264673, RCOM_1467110 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
|
| Family |
bHLH |
| Protein Properties |
Length: 567aa MW: 62475.1 Da PI: 8.037 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 30138.m003913 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 52.7 | 7.7e-17 | 265 | 313 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r +h++ E+rRR++iN++f+ Lrel+P+ ++K +Ka+ L +++eYI+ L
30138.m003913 265 RSKHSATEQRRRSKINDRFQMLRELIPHG----DQKRDKASFLLEVIEYIQFL 313
889*************************7....7*****************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006351 | Biological Process | transcription, DNA-templated |
| GO:0009742 | Biological Process | brassinosteroid mediated signaling pathway |
| GO:1902448 | Biological Process | positive regulation of shade avoidance |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 567 aa
Download sequence Send
to blast |
MELPQQQRIF EAEGRKPTHN FLSLYSHSTV QQDPRPPSSQ GYLKTHDFLQ PLERIGKTAA 60
KEETAAEVSS HEKPSPPALP PSMEHTLPGG IGTYSISHIS NYFNQKVPKP EGSPIFTVAQ 120
ASSIEKNEEH SNCSSYTGSG FTLWEESAIN KGKTGKENVG ERSNAVTEEA AGNVDRWTTP 180
ERPSQSSTNN HRNSFSSLSS SQPSGQKSQS FMEMIKSAKD SSQDDKLDEE EEFVLKKETP 240
SPIRKGELRV KVDGKSTDQK ANTPRSKHSA TEQRRRSKIN DRFQMLRELI PHGDQKRDKA 300
SFLLEVIEYI QFLHEKVHKY EGSYQRWNNE PAKLVPWRNG SRSVESYVDQ SRGSNSGASP 360
ALLFAAKLEE KNINLSPSVP GSAQNRVESD VNSATTFMVD HYPGMTNKGM PFPVSLQPNF 420
FNCGRNGGAV AQLPPRLVSD VENTASQPES QSNQTRSCTT EGAVAVDKLK EQQLSIEGGT 480
INISSVYSQG LLNTLTQALQ SSGVDLSQAS ISVQIDLGKR ANRQSNIPTS INKDNEVPSC 540
NQGTIRPRVS SGEESDHALK KLKTSKS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Positive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation. {ECO:0000269|PubMed:15680330}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by cold treatment. {ECO:0000269|PubMed:12679534}. |
