 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
30068.m002645 |
| Common Name | LOC8278506, RCOM_1315820 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
|
| Family |
G2-like |
| Protein Properties |
Length: 340aa MW: 38681 Da PI: 9.4501 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 30068.m002645 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.2 | 3.2e-32 | 201 | 254 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
30068.m002645 201 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 254
9****************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:0048481 | Biological Process | plant ovule development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MELFPAQPDL SLQISPPNSK PTSTWRRTEE EIDLGFWKRA LDSRARPDSS CFELSLSNPR 60
ISESSKHFHL LQNSNNYNGT NLFNSFQQNQ YPHHQQPKSH LLHQHSPHFQ QQQHHQQQQP 120
GLSQDLGFLR PIRGIPVYQN PPTTPPFPFS HPQTLDNSCS QTSSLATNNS TTTNIGHFQS 180
QGLMRSRLMS RFPAKRSMRA PRMRWTTTLH ARFVHAVELL GGHERATPKS VLELMDVKDL 240
TLAHVKSHLQ MYRTVKTTDR AAASSGQSDI FDNGSSGDTS EDLMFEIQNS RRSDISMQQG 300
RPNGHHDKDY QGLWSNSSRE AWLHVKSKDS CGNLTSLEVP
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-16 | 202 | 256 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-16 | 202 | 256 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 1e-16 | 202 | 256 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-16 | 202 | 256 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-16 | 202 | 256 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-16 | 202 | 256 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-16 | 202 | 256 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-16 | 202 | 256 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-16 | 202 | 256 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-16 | 202 | 256 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-16 | 202 | 256 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-16 | 202 | 256 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}. |
