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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
29923.m000827 |
| Common Name | RCOM_1070220 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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| Family |
AP2 |
| Protein Properties |
Length: 473aa MW: 52632.4 Da PI: 6.9476 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 29923.m000827 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 39.4 | 1.5e-12 | 247 | 297 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV+ +k grW+A+ + g +k+ +lg f+++ eAa+a++ a+ k +g
29923.m000827 247 SKYRGVTLHK-CGRWEARMGQF--HG-KKYMYLGLFDSEVEAARAYDMAAIKCNG 297
89********.7******6663..33.6**********99**********99776 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0032440 | Molecular Function | 2-alkenal reductase [NAD(P)] activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 473 aa
Download sequence Send
to blast |
MLDLNLDIIS SDSSCHSHNS KRKDRSKNDY MVIPEVPVVP IEEDSGTSNS SIIINTEEAL 60
TNPGDENSSN NIHNSAFIFD ILKKEKADDD SNSNDNAFRE SKSNPHQYFT TQQLFPERSQ 120
LDLDLKSGLA MIRPQQHQWL KLSEMDSSAD GGEAELRIVQ QKQQQMRKSR RGPRDCGKQV 180
YLGGFDTALS AARAYDRAAI KFRGVDADIN FTLSDYEEDM KQMKNLGKEE FVHILRRQSN 240
GFARGSSKYR GVTLHKCGRW EARMGQFHGK KYMYLGLFDS EVEAARAYDM AAIKCNGREA 300
VTNFEPSVYG GGGMVFDPTG NGHNLDLSLG IAVPRNDSKG NSKHVRDYCY FPCTNDREVP 360
NNERPMVESA ASSAPKGVLH ENSLPLASKN RPTLSGIFSG LLPPGDKERF INKRVEADSS 420
QKTSSWLWKI NGNNNNNNNN VATNSKISVA ASSGFASSSD SHCFFNNLSL QPE
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor (By similarity). Involved in spikelet transition. Regulator of starch biosynthesis especially during seed development (e.g. endosperm starch granules); represses the expression of type I starch synthesis genes. Prevents lemma and palea elongation as well as grain growth (By similarity). {ECO:0000250|UniProtKB:P47927, ECO:0000250|UniProtKB:Q2TQ34}. |
