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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
29851.m002359 |
Common Name | LOC8275575, RCOM_0934830 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family |
NAC |
Protein Properties |
Length: 355aa MW: 38953.6 Da PI: 9.3567 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
29851.m002359 | genome | JCVI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 173 | 8.7e-54 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95
lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++
29851.m002359 15 LPPGFRFHPTDEELVVHYLKKKAASAPLPV-TIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASn 109
79****************************.89***************8888999**************************************985 PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ ++vg+kk Lvfy g+ pkg kt+W+mheyrl
29851.m002359 110 GAQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142
6778***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MESTDSSSGS QHPHLPPGFR FHPTDEELVV HYLKKKAASA PLPVTIIAEV DLYKFDPWEL 60 PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILASNG AQKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLVDNNNSSS KPPGFDLANK KGSLRLDDWV LCRIYKKNNS 180 QRTMDRDKED SMEGFLATLP INPKPASSSV SKPAHAYGSV LDNEENFFEG ILTGGDGMQN 240 SSVSHQFPSS SPKQHMSIAS ISTSNPLAIK RVIPSQYWNH EAIAGSSIAA ASSGKRFHGD 300 LNSCSTGTED NTSFVSLLSQ LPQAGAPFHS NTFIGSLGDG VLRQQFQLPS MNWNS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-75 | 15 | 180 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-75 | 15 | 180 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-75 | 15 | 180 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-75 | 15 | 180 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-75 | 15 | 180 | 20 | 171 | NAC domain-containing protein 19 |
3swm_B | 1e-75 | 15 | 180 | 20 | 171 | NAC domain-containing protein 19 |
3swm_C | 1e-75 | 15 | 180 | 20 | 171 | NAC domain-containing protein 19 |
3swm_D | 1e-75 | 15 | 180 | 20 | 171 | NAC domain-containing protein 19 |
3swp_A | 1e-75 | 15 | 180 | 20 | 171 | NAC domain-containing protein 19 |
3swp_B | 1e-75 | 15 | 180 | 20 | 171 | NAC domain-containing protein 19 |
3swp_C | 1e-75 | 15 | 180 | 20 | 171 | NAC domain-containing protein 19 |
3swp_D | 1e-75 | 15 | 180 | 20 | 171 | NAC domain-containing protein 19 |
4dul_A | 1e-75 | 15 | 180 | 17 | 168 | NAC domain-containing protein 19 |
4dul_B | 1e-75 | 15 | 180 | 17 | 168 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |