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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
29841.m002790 |
Common Name | LOC8271382, RCOM_0897650 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family |
NAC |
Protein Properties |
Length: 320aa MW: 36561.9 Da PI: 5.776 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
29841.m002790 | genome | JCVI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 128.5 | 5.1e-40 | 64 | 192 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppG++F+P+d el+v+yL++k+ +++l+ + i+e+++yk++P++L + + +++++ewyfFs+rd+ky++g+r +r k gyWk+tg k+v
29841.m002790 64 LPPGYKFKPSDGELIVHYLQRKILNQTLPP-HRINELEMYKFNPETLAAdyasSGNGGREEWYFFSPRDQKYPNGSRLRRDPKCGYWKSTGAYKDV 158
79*************************999.67**************8534433333667************************************ PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+g++vglk+ Lvfyk r+p +ktdW+mhe+++
29841.m002790 159 RF-NGHKVGLKRLLVFYKRRSPF-HKTDWIMHEFSI 192
*9.999***********988888.8*********86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MEYTADPTSN NVSGILDSLI NDNETDITAI NVAVAVADHD MPDADIVPAV DNNNREEGEY 60 LKILPPGYKF KPSDGELIVH YLQRKILNQT LPPHRINELE MYKFNPETLA ADYASSGNGG 120 REEWYFFSPR DQKYPNGSRL RRDPKCGYWK STGAYKDVRF NGHKVGLKRL LVFYKRRSPF 180 HKTDWIMHEF SINNPLDRRR PGIHDMELWQ HDWVLCRVYN RIYNKPPKAS SRPAQQPLEI 240 ENENHLPAQP IVGANGLDSS FAQMLEPASS SPSEFPCHQI QLPSDLEYDS HLPRADQMPE 300 NDDNAITSSL EVITNKISAL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 3e-39 | 64 | 221 | 20 | 168 | NAC domain-containing protein 19 |
3swm_B | 3e-39 | 64 | 221 | 20 | 168 | NAC domain-containing protein 19 |
3swm_C | 3e-39 | 64 | 221 | 20 | 168 | NAC domain-containing protein 19 |
3swm_D | 3e-39 | 64 | 221 | 20 | 168 | NAC domain-containing protein 19 |
3swp_A | 3e-39 | 64 | 221 | 20 | 168 | NAC domain-containing protein 19 |
3swp_B | 3e-39 | 64 | 221 | 20 | 168 | NAC domain-containing protein 19 |
3swp_C | 3e-39 | 64 | 221 | 20 | 168 | NAC domain-containing protein 19 |
3swp_D | 3e-39 | 64 | 221 | 20 | 168 | NAC domain-containing protein 19 |
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