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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
29838.m001708 |
Common Name | RCOM_0886500 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family |
NAC |
Protein Properties |
Length: 422aa MW: 48138.9 Da PI: 4.872 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
29838.m001708 | genome | JCVI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 121.9 | 5.7e-38 | 132 | 265 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
+p+G+rF P+deelv +yLk+k+eg +l+l i++vdiyk++P++L + +e+ewyfF++r++ +++g+r++r++++gyWk tg++kev +
29838.m001708 132 MPVGYRFMPNDEELV-NYLKHKIEGFPLPL-GLIHDVDIYKFHPQELTgEYELIGEREWYFFTPRNRISPNGSRPSRKASNGYWKPTGSEKEVPN- 224
699************.9*************.99**************9433335899*************************************9. PP
NAM 96 kgelvglkktLvfy........kgrapkgektdWvmheyrl 128
+++ vg++ +L +y k ++++g++tdW mhey +
29838.m001708 225 EESPVGVRMSLDYYefanteiqKRKQSSGTRTDWKMHEYIV 265
999***********88888886689999***********75 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 422 aa
Download sequence Send
to blast |
MEGPYDIPEK SSDNNNNNVS NNNHCSTVCG KAINNNAVLA DANIEANSAS EAVLMPFPYS 60 YLHEQDNDYN NSIIVNADVV NNNIGENFMP LHYDQFLYSN MGNNNNNSNN DNAIVAYENV 120 SDYGIKGNFR GMPVGYRFMP NDEELVNYLK HKIEGFPLPL GLIHDVDIYK FHPQELTGEY 180 ELIGEREWYF FTPRNRISPN GSRPSRKASN GYWKPTGSEK EVPNEESPVG VRMSLDYYEF 240 ANTEIQKRKQ SSGTRTDWKM HEYIVKQYKD NGNEYRKKFH ALAICKIYKK KAKNDEDEPA 300 AGTSSSVPKK APIQSQEPSS YGFQPISRFE EQAYWTQMMI TANNLLVPQA TTYAELVNNE 360 VTNVQPVPAQ IVEDQRDNSC PDSQRQNDDS CPDNEHQNDD SGLYCIVHSS RSWNKRLEKN 420 PN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 3e-36 | 132 | 292 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-36 | 132 | 292 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-36 | 132 | 292 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-36 | 132 | 292 | 17 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-36 | 132 | 292 | 20 | 170 | NAC domain-containing protein 19 |
3swm_B | 4e-36 | 132 | 292 | 20 | 170 | NAC domain-containing protein 19 |
3swm_C | 4e-36 | 132 | 292 | 20 | 170 | NAC domain-containing protein 19 |
3swm_D | 4e-36 | 132 | 292 | 20 | 170 | NAC domain-containing protein 19 |
3swp_A | 4e-36 | 132 | 292 | 20 | 170 | NAC domain-containing protein 19 |
3swp_B | 4e-36 | 132 | 292 | 20 | 170 | NAC domain-containing protein 19 |
3swp_C | 4e-36 | 132 | 292 | 20 | 170 | NAC domain-containing protein 19 |
3swp_D | 4e-36 | 132 | 292 | 20 | 170 | NAC domain-containing protein 19 |
4dul_A | 3e-36 | 132 | 292 | 17 | 167 | NAC domain-containing protein 19 |
4dul_B | 3e-36 | 132 | 292 | 17 | 167 | NAC domain-containing protein 19 |
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