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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
29827.m002603 |
| Common Name | LOC8280090, RCOM_0866520 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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| Family |
Trihelix |
| Protein Properties |
Length: 286aa MW: 33975.2 Da PI: 5.8516 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 29827.m002603 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 80.5 | 2.3e-25 | 36 | 117 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W ++e+++Li +r e+e+++ +k++k+lWe vs kmrerg++r+p qCk+kw+nl +ryk ++++ ++ +cp+f++l+
29827.m002603 36 QWGEEETKELIGIRGELEKDFTVAKRNKALWEIVSVKMRERGYHRTPPQCKCKWKNLINRYKGKETSDPDN----GLHCPFFEELH 117
7**************************************************************99999984....457******98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MFSSGDNNSL FRTIKVMAEV SGSVSPASSS SQVQVQWGEE ETKELIGIRG ELEKDFTVAK 60
RNKALWEIVS VKMRERGYHR TPPQCKCKWK NLINRYKGKE TSDPDNGLHC PFFEELHAVF 120
TERAKDMQRL LLESEAGSTQ GKKRFKRSFD EFSEDEDEDE DGSGEERPAK INLRKRKGER 180
IVPEMSSNAD IGGIQEMLKE FLQQQQQMEM QWREMMERRV HEQRRFEEEW RQAMEKIERE 240
RLMVEQAWRE REEQRRVREE NRAERRDALL TTLLDKLIHE NDMQGR
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