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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
29807.m000474 |
| Common Name | LOC8276198, RCOM_0825660 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
|
| Family |
G2-like |
| Protein Properties |
Length: 474aa MW: 52093.1 Da PI: 7.3712 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 29807.m000474 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.3 | 6.1e-32 | 251 | 306 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
29807.m000474 251 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 306
68****************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009266 | Biological Process | response to temperature stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0010452 | Biological Process | histone H3-K36 methylation |
| GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering |
| GO:1903507 | Biological Process | negative regulation of nucleic acid-templated transcription |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 474 aa
Download sequence Send
to blast |
MASPSELTLD CKPHSYSMLL KSFGDQNDHT QKLEEFLSRL EEEKLKIDAF KRELPLCMQL 60
LTDAVETSRQ QLQAYRANQG PRRILEEFMP LKNSTSETLD KSSNMSDKAN WMTTAQLWSQ 120
ESNEIKPQTT FNSPKETNIG FNVSPKLGLD TKQRNGGAFL PFSKERNLCP SPTLALASTD 180
KELMEDKKCL ETENGLSCSK RDNSSKVSNG GIMIEHGKGN GNLASCDGQP TNTGTGNNST 240
NTSTTTQTHR KARRCWSPDL HRRFVNALQM LGGSQVATPK QIRELMKVDG LTNDEVKSHL 300
QKYRLHTRRP SPSPQAPGAP TPQLVVLGGI WVPPEYATAA HGGTPTLYGT HHHPVSHAPP 360
PHFCAAPPVP QDFYTAAAAA GATTPPLPPP HHQLHHHTLH HQLHMYNKAT SQAHSSPESD 420
IRGTGDRSES IEDGKSESSS WKAESGENGG ERKGLAAFRE DGEESNGSEI TLKF
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-13 | 251 | 304 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-13 | 251 | 304 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-13 | 251 | 304 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-13 | 251 | 304 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}. |
