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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
29680.m001711 |
Common Name | LOC8258641, RCOM_0609760 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family |
G2-like |
Protein Properties |
Length: 459aa MW: 50769.3 Da PI: 5.0766 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
29680.m001711 | genome | JCVI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 107.4 | 8e-34 | 233 | 287 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k r+rWtpeLHe+Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+
29680.m001711 233 KHRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 287
68****************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 459 aa
Download sequence Send
to blast |
MSSPFPVLPT PLEGQYPKLP DSFQVSSERE LMRNPILQQT SPLCSNSGTV GHLFSSSMRS 60 SIEAQASSLA PQGGQSQNSP FISQSLRDKG SLPVLTTHSS NSEVQSTALI NHSEENKDMS 120 WTIDPLHDLL DFPENVAVQN GQVESTIGVI TSEDFSKRTD WQEWADQLIS VDDDLEPNWS 180 ELLNDANNAD RKQKVVKSSS QISVQPTVHQ PQPVHNGEPY SAANPMSAIP AAKHRMRWTP 240 ELHEAFVEAV NKLGGSERAT PKGVLKLMNV EGLTIYHVKS HLQKYRTARY KPESAEGTSE 300 KKLSPIDEMK SLDLKASMGI TEALRLQMEV QKRLHEQLEI QRNLQLRIEE QGRHLQMMFE 360 QQRKMEDDRS KASSSSLDDP SLPQSNIVQS PGNNKLEVSE LDHARTEISS GGGALEGSSQ 420 NGSRKQKAPE NRTGEDLDPE DDESGPASAK RPRADEIAA
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 5e-31 | 232 | 291 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 5e-31 | 232 | 291 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 5e-31 | 232 | 291 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 5e-31 | 232 | 291 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 5e-31 | 232 | 291 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 5e-31 | 232 | 291 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 5e-31 | 232 | 291 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 5e-31 | 232 | 291 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Bonnot C, et al.
A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana. New Phytol., 2016. 209(1): p. 161-76 [PMID:26243630] - Aleksza D,Horváth GV,Sándor G,Szabados L
Proline Accumulation Is Regulated by Transcription Factors Associated with Phosphate Starvation. Plant Physiol., 2017. 175(1): p. 555-567 [PMID:28765275]
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