 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
29489 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
|
| Family |
Nin-like |
| Protein Properties |
Length: 231aa MW: 26384.2 Da PI: 8.0026 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 29489 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 29.7 | 1.3e-09 | 63 | 106 | 6 | 49 |
RWP-RK 6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
+l++l ++ +p ++Ak g+ +CR+ G+ RWPhR
29489 63 DLHELYAFLMMPADKVAKAFGMPSGSFRLQCRKAGVTRWPHRHA 106
5788999999********************************75 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 231 aa
Download sequence Send
to blast |
MRTIANERDA LAATEARAAR AILDHRLGII DDDQRARRAA LVAKQFAERE ALAIDEELDE 60
PFDLHELYAF LMMPADKVAK AFGMPSGSFR LQCRKAGVTR WPHRHAQAVV GCHEYIAQLM 120
QHTLAQFEYS IDDMEMCDVN YYSHRARSAF LRMDYAMTDL LEDLDTLEKY ARALEGMFLR 180
TGTFDSVRSP EAFNRIRTKI YKHRSKVGCF VRKLFPSNLG GAIRPSLFDK *
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP000600 | 0.0 | CP000600.1 Ostreococcus lucimarinus CCE9901 chromosome 20, complete sequence. |
