PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 29097 | ||||||||
Common Name | SELMODRAFT_29097 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family | Dof | ||||||||
Protein Properties | Length: 64aa MW: 7370.18 Da PI: 10.2142 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 57.7 | 2.5e-18 | 3 | 63 | 5 | 58 |
zf-Dof 5 alkcprCdstntkfCyynnysls....qPryfCkaCrryWtkGGalrnv...PvGggrrkn 58 +cprC+s nt+f yynn + qPry C++C+ Wt+GG +r v P Gg +r + 29097 3 VYQCPRCQSYNTRFDYYNNEKSTgkrdQPRYACRSCKGKWTQGGQVRVVslsPTGGNKRTS 63 679****************86533444********************99667788888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 2.4E-27 | 1 | 64 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 3.0E-8 | 1 | 64 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 64 aa Download sequence Send to blast |
DNVYQCPRCQ SYNTRFDYYN NEKSTGKRDQ PRYACRSCKG KWTQGGQVRV VSLSPTGGNK 60 RTSK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002992665.1 | 6e-37 | uncharacterized protein LOC9630524 | ||||
Refseq | XP_024522107.1 | 6e-37 | uncharacterized protein LOC112343218 | ||||
TrEMBL | D8T546 | 2e-39 | D8T546_SELML; Uncharacterized protein (Fragment) | ||||
STRING | EFJ08196 | 4e-40 | (Selaginella moellendorffii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 4e-13 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | 29097 |
Entrez Gene | 9658510 |
Publications ? help Back to Top | |||
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