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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
29092.m000461 |
| Common Name | RCOM_0383990 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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| Family |
Trihelix |
| Protein Properties |
Length: 529aa MW: 61024.5 Da PI: 6.7605 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 29092.m000461 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 94.8 | 8e-30 | 81 | 166 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea
29092.m000461 81 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 166
8*************************************999*****************************98..55667*******85 PP
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| 2 | trihelix | 66.5 | 5.6e-21 | 381 | 459 | 2 | 77 |
trihelix 2 WtkqevlaLiearremeerlrrg...klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsesss 77
W+++ev L+++r++me+r++++ + +++lWee+++ m+ g+ers+ +Ckekw+++n++ +k+ke+++k+++e+s+
29092.m000461 381 WPENEVTRLMQFRSSMESRFNQSgciEEEEALWEEIAAEMACIGYERSALMCKEKWDSVNNYIRKTKESNNKKRKENSR 459
*********************97555699******************************************99776664 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009909 | Biological Process | regulation of flower development |
| GO:0010200 | Biological Process | response to chitin |
| GO:0046621 | Biological Process | negative regulation of organ growth |
| GO:0048442 | Biological Process | sepal development |
| GO:0048498 | Biological Process | establishment of petal orientation |
| GO:0090428 | Biological Process | perianth development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 529 aa
Download sequence Send
to blast |
MEMEDHSHHN QYNIDLRQFI TGRPTHFPPI PHPPELFSGH RNLQPPPPPP SQQHHYDMMM 60
LMPGGEAEVG CSFGGDGGTG RWPRQETLTL LEIRSRLDSK FKEANQKGPL WDEVSRIMSE 120
EHGYQRSGKK CREKFENLYK YYKKTKEGKA GRQDGKHYRF FRQLEALYGE TSNPASVPDT 180
QFVGNSLRFQ SAANTSTQAN HEAHHSQKLC DSLSFSNSSG FDTSSSEEND LSTATLVEND 240
SMEKRRKRRD GKSWKAKIKE FIDSQMRKLI ERQEAWLDKL TKTLEQKEQQ RMLREEEWRR 300
QESARIDREH KFWAKERAWI EARDAALMEA LKKLTGRDQV DASSPEEQVG TQTIRKRSEN 360
LIENGSDQTI HNNVKGDHHS WPENEVTRLM QFRSSMESRF NQSGCIEEEE ALWEEIAAEM 420
ACIGYERSAL MCKEKWDSVN NYIRKTKESN NKKRKENSRG SCYNFQSNDQ SVYNPGSGAY 480
CEINEQGQEG SSPANSNAGN AVSDSCFRFL MSDGENLWEN YGLKLSKGD
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}. |
