PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 28859.m000326
Common NameLOC8264008, RCOM_0347460
Organism
Ricinus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family SAP
Protein Properties Length: 447aa    MW: 49820.1 Da    PI: 6.8731
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
28859.m000326genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP782.72.2e-23814471454
            SAP   1 mssssssssseseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrl 96 
                    msssss  sse+++g++gg+g    ++e+egp++ r+ra+nevwpePfleala+qvaidasr++Grlaaa+alanvfqvcstwravsrsdllw+rl
  28859.m000326   1 MSSSSS-ASSENGNGANGGRG----GNEYEGPPRIRPRAINEVWPEPFLEALAAQVAIDASRFVGRLAAAQALANVFQVCSTWRAVSRSDLLWHRL 91 
                    666666.45557777666665....4589******************************************************************* PP

            SAP  97 trriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrd 192
                    trriW+rt+l++dtWreeyiyrhrtarnfrtr++s++tlqfdpad+d++nd+dal+Crclalsd+yla+Gf+dGa+rl+dl+trlh++tf+pqhrd
  28859.m000326  92 TRRIWNRTTLIQDTWREEYIYRHRTARNFRTRTSSHFTLQFDPADFDDPNDPDALICRCLALSDHYLACGFVDGAIRLYDLQTRLHTRTFRPQHRD 187
                    ************************************************************************************************ PP

            SAP 193 rlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltd 288
                    ++GrfsravsGi+is++rlvfa+l+Gdih+a+++g  +a +rr+++Gd+++dG+l+dfaG+g+WwvGly+GvpGrafhiW+++teel+fvGG ltd
  28859.m000326 188 HMGRFSRAVSGIIISNRRLVFASLNGDIHLAMLNG--NAFPRRVHYGDMLTDGVLIDFAGRGQWWVGLYVGVPGRAFHIWNGTTEELTFVGGLLTD 281
                    **********************************9..88********************************************************* PP

            SAP 289 PeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenl..eevcrfrv 382
                    P++v+GWhml+++tel+Grvrvt+++ta+aCt+l++++fdlrnqgv+l+ e++r G++vs++d++n+ayv vds+Gva+v+r++n+  ee+c+f+v
  28859.m000326 282 PDSVTGWHMLNDITELLGRVRVTSEATAIACTRLSVMSFDLRNQGVILG-EDDRGGFMVSCFDVYNSAYVSVDSSGVARVHRADNIggEEICSFNV 376
                    *************************************************.67899******************************9999******* PP

            SAP 383 rgaqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfga 454
                    r +qrg++gC+nggyal++aggv+r+Weie+++++lys+rer+gevna+ ad+rhva++ss+gtih++dfga
  28859.m000326 377 R-VQRGMMGCMNGGYALMCAGGVVRIWEIEQRGELLYSFRERIGEVNAMAADERHVAAASSEGTIHVWDFGA 447
                    *.99******************************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813836.32E-965118IPR001810F-box domain
Gene3DG3DSA:1.20.1280.504.8E-865133No hitNo description
SMARTSM0032023113171IPR001680WD40 repeat
Gene3DG3DSA:2.130.10.103.4E-14148228IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509783.11E-18148218IPR017986WD40-repeat-containing domain
SuperFamilySSF509783.11E-18321444IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.103.4E-14368445IPR015943WD40/YVTN repeat-like-containing domain
PROSITE profilePS502948.861397447IPR017986WD40-repeat-containing domain
SMARTSM003200.38407444IPR001680WD40 repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MSSSSSASSE NGNGANGGRG GNEYEGPPRI RPRAINEVWP EPFLEALAAQ VAIDASRFVG  60
RLAAAQALAN VFQVCSTWRA VSRSDLLWHR LTRRIWNRTT LIQDTWREEY IYRHRTARNF  120
RTRTSSHFTL QFDPADFDDP NDPDALICRC LALSDHYLAC GFVDGAIRLY DLQTRLHTRT  180
FRPQHRDHMG RFSRAVSGII ISNRRLVFAS LNGDIHLAML NGNAFPRRVH YGDMLTDGVL  240
IDFAGRGQWW VGLYVGVPGR AFHIWNGTTE ELTFVGGLLT DPDSVTGWHM LNDITELLGR  300
VRVTSEATAI ACTRLSVMSF DLRNQGVILG EDDRGGFMVS CFDVYNSAYV SVDSSGVARV  360
HRADNIGGEE ICSFNVRVQR GMMGCMNGGY ALMCAGGVVR IWEIEQRGEL LYSFRERIGE  420
VNAMAADERH VAAASSEGTI HVWDFGA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMap28859.m000326
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002530220.20.0LOW QUALITY PROTEIN: transcriptional regulator STERILE APETALA, partial
SwissprotQ9FKH11e-177SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLB9SW510.0B9SW51_RICCO; Transcriptional regulator STERILE APETALA, putative
STRINGXP_002530220.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76873146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-167SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]