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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
28644.m000924 |
Common Name | RCOM_0297110 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family |
NAC |
Protein Properties |
Length: 251aa MW: 28542.7 Da PI: 4.722 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
28644.m000924 | genome | JCVI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 106.3 | 3.8e-33 | 12 | 87 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
k+++++w+fFs+rd+ky++g r+nrat++gyWkatgkd+++++ ++++ g+kktLvfy+grap+ge+tdWvmhey+l
28644.m000924 12 KTGDRQWFFFSPRDRKYPNGARSNRATRQGYWKATGKDRNITC-NSRTAGVKKTLVFYRGRAPNGERTDWVMHEYTL 87
67899**************************************.999****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010200 | Biological Process | response to chitin |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0070301 | Biological Process | cellular response to hydrogen peroxide |
GO:1900057 | Biological Process | positive regulation of leaf senescence |
GO:0005634 | Cellular Component | nucleus |
GO:0005789 | Cellular Component | endoplasmic reticulum membrane |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MQFSDSGQSI LKTGDRQWFF FSPRDRKYPN GARSNRATRQ GYWKATGKDR NITCNSRTAG 60 VKKTLVFYRG RAPNGERTDW VMHEYTLDED ELKRCPNVKD YYALYKVYKK SGPGPKNGEQ 120 YGAPFKEEDW ADDECADMNN FVTPVKQPNV VMPPVDNNKS SAQVELPLND LENFMKQIAD 180 EDPLDPPLIA DFTSNLQQVI GDEETRSTLV DPPSREVTLF EPISVSPTSC EQYDLQASLD 240 FNQSATSNCI H
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-31 | 14 | 110 | 69 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-31 | 14 | 110 | 69 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-31 | 14 | 110 | 69 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-31 | 14 | 110 | 69 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-31 | 14 | 116 | 72 | 174 | NAC domain-containing protein 19 |
3swm_B | 4e-31 | 14 | 116 | 72 | 174 | NAC domain-containing protein 19 |
3swm_C | 4e-31 | 14 | 116 | 72 | 174 | NAC domain-containing protein 19 |
3swm_D | 4e-31 | 14 | 116 | 72 | 174 | NAC domain-containing protein 19 |
3swp_A | 4e-31 | 14 | 116 | 72 | 174 | NAC domain-containing protein 19 |
3swp_B | 4e-31 | 14 | 116 | 72 | 174 | NAC domain-containing protein 19 |
3swp_C | 4e-31 | 14 | 116 | 72 | 174 | NAC domain-containing protein 19 |
3swp_D | 4e-31 | 14 | 116 | 72 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-31 | 14 | 110 | 69 | 165 | NAC domain-containing protein 19 |
4dul_B | 4e-31 | 14 | 110 | 69 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). Transcriptional activator that promotes leaf senescence by up-regulating senescence-associated genes in response to developmental and stress-induced senescence signals. Functions in salt and oxidative stress-responsive signaling pathways. Binds to the promoter of NAC029/NAP and NAC059/ORS1 genes (PubMed:23926065). {ECO:0000250|UniProtKB:Q949N0, ECO:0000269|PubMed:23926065}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold, salt, drought stress and methyl methanesulfonate (MMS) treatment. {ECO:0000269|PubMed:17158162}. |