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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
28207.m000107 |
| Common Name | RCOM_0200170 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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| Family |
LBD |
| Protein Properties |
Length: 239aa MW: 26001.8 Da PI: 8.2063 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 28207.m000107 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 98.7 | 5.7e-31 | 4 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+C++C+vlr++C++dC++ p++ p++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +PvyG+vg++++ ++ql+q++
28207.m000107 4 SCSGCRVLRKGCSDDCTIKPCLqwlnsPKSQANATLFLAKFYGRAGLINLINAGPQHLRPAIFKSLLYEACGRIVNPVYGSVGLLWTRNWQLCQAA 99
6*********************************************************************************************** PP
DUF260 92 aelallkee 100
+e++l++e+
28207.m000107 100 VEAVLRGEP 108
**9988765 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MRLSCSGCRV LRKGCSDDCT IKPCLQWLNS PKSQANATLF LAKFYGRAGL INLINAGPQH 60
LRPAIFKSLL YEACGRIVNP VYGSVGLLWT RNWQLCQAAV EAVLRGEPIK QISSSNELAI 120
NACEIRHVYK DDSLATMPAV SDQLHKIKRK PKSQFKRSAS KPKLKVEPAL EFEAETGLLS 180
LSGLASHDSG VSWRPTIDSD SGEGDSMSAE TVEASLAKLD EQADGSNVEL ELTLGLKIS
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