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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
139631 |
Common Name | SELMODRAFT_139631, SELMODRAFT_87254 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
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Family |
HD-ZIP |
Protein Properties |
Length: 186aa MW: 20897.8 Da PI: 10.0607 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
139631 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 57.7 | 2e-18 | 16 | 70 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Le+ F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
139631 16 RKKLRLSKEQSALLEDSFREHSTLNPKQKNALAKQLNLRPRQVEVWFQNRRARTK 70
778899***********************************************98 PP
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2 | HD-ZIP_I/II | 123.7 | 8.7e-40 | 16 | 104 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rlskeq++lLE+sF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+ ++ l+een+rL+ke +eLr +
139631 16 RKKLRLSKEQSALLEDSFREHSTLNPKQKNALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKKYCEGLSEENRRLQKELQELR-A 104
69*************************************************************************************9.4 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 186 aa
Download sequence Send
to blast |
MTSSRAASDE EEGGTRKKLR LSKEQSALLE DSFREHSTLN PKQKNALAKQ LNLRPRQVEV 60 WFQNRRARTK LKQTEVDCEL LKKYCEGLSE ENRRLQKELQ ELRALKISPP CVITHDFYMP 120 LPATTLTMCP SCERLASSMD NGNNTGNTTT KVPSKPLSTN FQSTAATTMA RFAQSRPTPS 180 LLQPV*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 14 | 20 | TRKKLRL |
2 | 64 | 72 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |