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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
112063 |
| Common Name | SELMODRAFT_112063, SELMODRAFT_136229 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Lycopodiidae; Selaginellales; Selaginellaceae; Selaginella
|
| Family |
EIL |
| Protein Properties |
Length: 250aa MW: 28316.9 Da PI: 10.535 |
| Description |
EIL family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 112063 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | EIN3 | 422.8 | 3.5e-129 | 4 | 250 | 1 | 249 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdr 103
+el+kr w d+ +lkr+k+++k + + k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd++raWWkekv+fdr
112063 4 DELEKRIWNDRLRLKRIKDKQKARNLGNL-----PKHKQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNIRAWWKEKVRFDR 101
79******************998665555.....5899***************************************************************** PP
XXXXXXXXXXXXXXXXXXXXXX.......XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--H CS
EIN3 104 ngpaaiskyqaknlilsgessl...qtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkk 203
ngpaai+ky+a++ i s++ + +++ ++h+l+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWP+G+e+ww+elgl+k qg+ppykkphdlkk
112063 102 NGPAAIAKYEAEHGICSRSGGGagqLSAAAPTPHTLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVAPPWWPSGDEEWWPELGLPKGQGPPPYKKPHDLKK 204
***************9876554221356889************************************************************************ PP
HHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHH CS
EIN3 204 awkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsv 249
+wkv+vLtavi+hmsp+i +ir+l+rqsk+lqdkm+akes++++sv
112063 205 VWKVGVLTAVIRHMSPDIGKIRKLVRQSKCLQDKMTAKESATWISV 250
*******************************************986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0071281 | Biological Process | cellular response to iron ion |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 250 aa
Download sequence Send
to blast |
MDVDELEKRI WNDRLRLKRI KDKQKARNLG NLPKHKQSQE QARRKKMSRA QDGILKYMLK 60
MMEVCKAQGF VYGIIPEKGK PVSGASDNIR AWWKEKVRFD RNGPAAIAKY EAEHGICSRS 120
GGGAGQLSAA APTPHTLQEL QDTTLGSLLS ALMQHCDPPQ RRYPLEKGVA PPWWPSGDEE 180
WWPELGLPKG QGPPPYKKPH DLKKVWKVGV LTAVIRHMSP DIGKIRKLVR QSKCLQDKMT 240
AKESATWISV
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Banks JA, et al.
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Science, 2011. 332(6032): p. 960-3
[PMID:21551031] - Kim HG, et al.
GDSL LIPASE1 modulates plant immunity through feedback regulation of ethylene signaling.
Plant Physiol., 2013. 163(4): p. 1776-91
[PMID:24170202] - Zhang GB,Yi HY,Gong JM
The Arabidopsis ethylene/jasmonic acid-NRT signaling module coordinates nitrate reallocation and the trade-off between growth and environmental adaptation.
Plant Cell, 2014. 26(10): p. 3984-98
[PMID:25326291] - Wang J, et al.
Arabidopsis ROOT HAIR DEFECTIVE3 is involved in nitrogen starvation-induced anthocyanin accumulation.
J Integr Plant Biol, 2015. 57(8): p. 708-21
[PMID:25494721] - Qing D, et al.
Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-Terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis.
Mol Plant, 2016. 9(1): p. 158-174
[PMID:26476206] - Poulios S,Vlachonasios KE
Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses in Arabidopsis thaliana.
J. Exp. Bot., 2016. 67(3): p. 905-18
[PMID:26596766] - Shen X,Li Y,Pan Y,Zhong S
Activation of HLS1 by Mechanical Stress via Ethylene-Stabilized EIN3 Is Crucial for Seedling Soil Emergence.
Front Plant Sci, 2016. 7: p. 1571
[PMID:27822221] - Abozeid A, et al.
Ethylene Improves Root System Development under Cadmium Stress by Modulating Superoxide Anion Concentration in Arabidopsis thaliana.
Front Plant Sci, 2017. 8: p. 253
[PMID:28286514] - Feng Y, et al.
Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis.
Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839
[PMID:29233944] - Harkey AF, et al.
Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene.
Plant Physiol., 2018. 176(3): p. 2095-2118
[PMID:29259106]
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